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gnu: Add r-disgenet2r.

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* gnu/packages/bioinformatics.scm (r-disgenet2r): New variable.
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Ricardo Wurmus 2022-11-15 11:02:45 +01:00
parent 92af171860
commit 02db3f51b7
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1 changed files with 40 additions and 0 deletions
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gnu/packages/bioinformatics.scm
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@ -12101,6 +12101,46 @@ (define-public biobambam2
;; the GPL, but the license headers include the "or later" clause.
(license license:gpl3+)))
(define-public r-disgenet2r
(let ((commit "8d8ce37da7384004038b25e784b9f7cfe2353de1")
(revision "1"))
(package
(name "r-disgenet2r")
(version (git-version "0.99.2" revision commit))
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://bitbucket.org/ibi_group/disgenet2r")
(commit commit)))
(file-name (git-file-name name version))
(sha256
(base32
"0dvk75s6wqssdyfn5iczldb8krvrz2s0dslxns4571cb2pr09b84"))))
(properties `((upstream-name . "disgenet2r")))
(build-system r-build-system)
(propagated-inputs (list r-data-table
r-ggplot2
r-gtable
r-httr
r-igraph
r-jsonlite
r-purrr
r-reshape
r-reshape2
r-sparql
r-stringr
r-tidyr
r-tidyverse
r-venndiagram))
(native-inputs (list r-knitr))
(home-page "https://bitbucket.org/ibi_group/disgenet2r")
(synopsis "Query, visualize, and expand DisGeNET data")
(description
"This is an R package to query and expand DisGeNET data, and to
visualize the results within R framework. The disgenet2r package is designed
to retrieve data from DisGeNET v6.0 (Jan, 2019).")
(license license:expat))))
(define-public r-dyngen
(package
(name "r-dyngen")