mirror of
https://git.in.rschanz.org/ryan77627/guix.git
synced 2024-12-25 05:48:07 -05:00
gnu: Add seqPattern.
* gnu/packages/bioinformatics.scm (r-seqpattern): New variable.
This commit is contained in:
parent
c43a011de3
commit
03ea5a357e
1 changed files with 26 additions and 0 deletions
|
@ -3886,6 +3886,32 @@ (define-public r-impute
|
|||
microarray data, using nearest neighbor averaging.")
|
||||
(license license:gpl2+)))
|
||||
|
||||
(define-public r-seqpattern
|
||||
(package
|
||||
(name "r-seqpattern")
|
||||
(version "1.2.0")
|
||||
(source (origin
|
||||
(method url-fetch)
|
||||
(uri (bioconductor-uri "seqPattern" version))
|
||||
(sha256
|
||||
(base32
|
||||
"0p9zj6bic7sa0hb2bjm988kkk5n9r1kvlbqkzvy702f642n0j53i"))))
|
||||
(properties
|
||||
`((upstream-name . "seqPattern")))
|
||||
(build-system r-build-system)
|
||||
(propagated-inputs
|
||||
`(("r-biostrings" ,r-biostrings)
|
||||
("r-genomicranges" ,r-genomicranges)
|
||||
("r-iranges" ,r-iranges)
|
||||
("r-plotrix" ,r-plotrix)))
|
||||
(home-page "http://bioconductor.org/packages/seqPattern")
|
||||
(synopsis "Visualising oligonucleotide patterns and motif occurrences")
|
||||
(description
|
||||
"This package provides tools to visualize oligonucleotide patterns and
|
||||
sequence motif occurrences across a large set of sequences centred at a common
|
||||
reference point and sorted by a user defined feature.")
|
||||
(license license:gpl3+)))
|
||||
|
||||
(define-public r-qtl
|
||||
(package
|
||||
(name "r-qtl")
|
||||
|
|
Loading…
Reference in a new issue