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gnu: Add r-multiassayexperiment.

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* gnu/packages/bioconductor.scm (r-multiassayexperiment): New variable.
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Ricardo Wurmus 2019-12-18 15:25:08 +01:00
parent 244270e6ae
commit 0678479391
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gnu/packages/bioconductor.scm
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@ -7171,3 +7171,36 @@ (define-public r-experimenthub
and manages a local cache of files retrieved enabling quick and reproducible
access.")
(license license:artistic2.0)))
(define-public r-multiassayexperiment
(package
(name "r-multiassayexperiment")
(version "1.12.0")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "MultiAssayExperiment" version))
(sha256
(base32
"0hqg0b0hd5msnb4jcn1nbfyy1n1llfkipy2ivwncivkmbdn8psp4"))))
(properties
`((upstream-name . "MultiAssayExperiment")))
(build-system r-build-system)
(propagated-inputs
`(("r-biobase" ,r-biobase)
("r-biocgenerics" ,r-biocgenerics)
("r-genomicranges" ,r-genomicranges)
("r-iranges" ,r-iranges)
("r-s4vectors" ,r-s4vectors)
("r-summarizedexperiment" ,r-summarizedexperiment)
("r-tidyr" ,r-tidyr)))
(home-page "http://waldronlab.io/MultiAssayExperiment/")
(synopsis "Integration of multi-omics experiments in Bioconductor")
(description
"MultiAssayExperiment harmonizes data management of multiple assays
performed on an overlapping set of specimens. It provides a familiar
Bioconductor user experience by extending concepts from
@code{SummarizedExperiment}, supporting an open-ended mix of standard data
classes for individual assays, and allowing subsetting by genomic ranges or
rownames.")
(license license:artistic2.0)))