gnu: Add python-cwlformat.

* gnu/packages/bioinformatics.scm (python-cwlformat): New variable.

Change-Id: Ib2d79e350ab100c61c7afe2d5d3eafc72146e493
Signed-off-by: Arun Isaac <arunisaac@systemreboot.net>
This commit is contained in:
Arun Isaac 2023-10-22 20:21:23 +01:00
parent 65584b9ba8
commit 0728b45295
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@ -5131,6 +5131,33 @@ (define-public python-scrublet
doublets in single-cell RNA-seq data.") doublets in single-cell RNA-seq data.")
(license license:expat))) (license license:expat)))
(define-public python-cwlformat
(package
(name "python-cwlformat")
(version "2022.02.18")
(source
;; The PyPI tarball is missing Readme.md. Readme.md is required for the
;; build.
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/rabix/cwl-format")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32
"0agkz2w86k91rc9m5vx5hsqi5nm6fcmzkng6j99hjapz0r9233ql"))))
(build-system pyproject-build-system)
(propagated-inputs
(list python-importlib-resources
python-ruamel.yaml))
(home-page "https://github.com/rabix/cwl-format")
(synopsis "Prettifier for CWL code")
(description "@code{python-cwlformat} is a specification and a reference
implementation for a very opinionated @acronym{CWL, Common Workflow Language}
code formatter. It outputs CWL in a standardized YAML format.")
(license license:asl2.0)))
(define-public cwltool (define-public cwltool
(package (package
(name "cwltool") (name "cwltool")