gnu: Add r-cycombine.

* gnu/packages/bioconductor.scm (r-cycombine): New variable.
This commit is contained in:
Mădălin Ionel Patrașcu 2022-03-21 19:02:42 +01:00 committed by Ricardo Wurmus
parent 8e994ea512
commit 0a5c2816ea
No known key found for this signature in database
GPG key ID: 197A5888235FACAC

View file

@ -10066,6 +10066,49 @@ (define-public r-consensusclusterplus
cluster count and membership by stability evidence in unsupervised analysis.") cluster count and membership by stability evidence in unsupervised analysis.")
(license license:gpl2))) (license license:gpl2)))
;; This is the latest commit and it solves a bug from the latest release.
(define-public r-cycombine
(let ((commit "f18504bc83ff5daee2b5eb4b28f09abdaaa66698") (revision "1"))
(package
(name "r-cycombine")
(version (git-version "0.2.6" revision commit))
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/biosurf/cyCombine")
(commit commit)))
(file-name (git-file-name name version))
(sha256
(base32
"1fiwnik8iahg01732fik85xhz359x32f1xc59h443pdf7jancskm"))))
(properties `((upstream-name . "cyCombine")))
(build-system r-build-system)
(propagated-inputs
(list r-biobase
r-cytolib
r-dplyr
r-flowcore
r-ggplot2
r-knitr
r-kohonen
r-magrittr
r-purrr
r-rcolorbrewer
r-readr
r-readxl
r-stringr
r-sva
r-tibble
r-tidyr))
(native-inputs (list r-knitr))
(home-page "https://github.com/biosurf/cyCombine")
(synopsis "Integration of single-cell cytometry datasets")
(description
"This package provides a method for combining single-cell cytometry
datasets, which increases the analytical flexibility and the statistical power
of the analyses while minimizing technical noise.")
(license license:expat))))
(define-public r-cytolib (define-public r-cytolib
(package (package
(name "r-cytolib") (name "r-cytolib")