From 1042e3481d12f6ce550d1c49dd72b3cf85665394 Mon Sep 17 00:00:00 2001 From: Tobias Geerinckx-Rice Date: Mon, 8 Jul 2019 16:07:04 +0200 Subject: [PATCH] gnu: r-xbioc: Update to 0.1.16-1.6ff0670. This is needed to deprecate r-biocinstaller, which is no longer distributed. * gnu/packages/bioinformatics.scm (r-xbioc): Update to 0.1.16-1.6ff0670. [propagated-inputs]: Replace deprecated r-biocinstaller with r-biocmanager. --- gnu/packages/bioinformatics.scm | 8 ++++---- 1 file changed, 4 insertions(+), 4 deletions(-) diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index f8ac41c249..b6f5a35355 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -13622,10 +13622,10 @@ (define-public r-pore (define-public r-xbioc (let ((revision "1") - (commit "f798c187e376fd1ba27abd559f47bbae7e3e466b")) + (commit "6ff0670a37ab3036aaf1d94aa4b208310946b0b5")) (package (name "r-xbioc") - (version (git-version "0.1.15" revision commit)) + (version (git-version "0.1.16" revision commit)) (source (origin (method git-fetch) (uri (git-reference @@ -13634,13 +13634,13 @@ (define-public r-xbioc (file-name (git-file-name name version)) (sha256 (base32 - "03hffh2f6z71y6l6dqpa5cql3hdaw7zigdi8sm2dzgx379k9rgrr")))) + "0w8bsq5myiwkfhh83nm6is5ichiyvwa1axx2szvxnzq39x6knf66")))) (build-system r-build-system) (propagated-inputs `(("r-annotationdbi" ,r-annotationdbi) ("r-assertthat" ,r-assertthat) ("r-biobase" ,r-biobase) - ("r-biocinstaller" ,r-biocinstaller) + ("r-biocmanager" ,r-biocmanager) ("r-digest" ,r-digest) ("r-pkgmaker" ,r-pkgmaker) ("r-plyr" ,r-plyr)