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gnu: Add r-reportingtools.

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* gnu/packages/bioconductor.scm (r-reportingtools): New variable.
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Ricardo Wurmus 2019-09-15 20:57:38 +02:00
parent 83b4209122
commit 15184fb386
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48
gnu/packages/bioconductor.scm
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@ -1151,6 +1151,54 @@ (define-public r-regioner
region sets and other genomic features.")
(license license:artistic2.0)))
(define-public r-reportingtools
(package
(name "r-reportingtools")
(version "2.24.0")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "ReportingTools" version))
(sha256
(base32
"16ska7mlacka0xi8x2icy8v42vaxccb3a1x73szmfvcrwr592qsc"))))
(properties
`((upstream-name . "ReportingTools")))
(build-system r-build-system)
(propagated-inputs
`(("r-annotate" ,r-annotate)
("r-annotationdbi" ,r-annotationdbi)
("r-biobase" ,r-biobase)
("r-biocgenerics" ,r-biocgenerics)
("r-category" ,r-category)
("r-deseq2" ,r-deseq2)
("r-edger" ,r-edger)
("r-ggbio" ,r-ggbio)
("r-ggplot2" ,r-ggplot2)
("r-gostats" ,r-gostats)
("r-gseabase" ,r-gseabase)
("r-hwriter" ,r-hwriter)
("r-iranges" ,r-iranges)
("r-knitr" ,r-knitr)
("r-lattice" ,r-lattice)
("r-limma" ,r-limma)
("r-pfam-db" ,r-pfam-db)
("r-r-utils" ,r-r-utils)
("r-xml" ,r-xml)))
(home-page "https://bioconductor.org/packages/ReportingTools/")
(synopsis "Tools for making reports in various formats")
(description
"The ReportingTools package enables users to easily display reports of
analysis results generated from sources such as microarray and sequencing
data. The package allows users to create HTML pages that may be viewed on a
web browser, or in other formats. Users can generate tables with sortable and
filterable columns, make and display plots, and link table entries to other
data sources such as NCBI or larger plots within the HTML page. Using the
package, users can also produce a table of contents page to link various
reports together for a particular project that can be viewed in a web
browser.")
(license license:artistic2.0)))
(define-public r-geneplotter
(package
(name "r-geneplotter")