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gnu: r-annotationdbi: Move to (gnu packages bioconductor).

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* gnu/packages/bioinformatics.scm (r-annotationdbi): Move from here...
* gnu/packages/bioconductor.scm (r-annotationdbi): ...to here.
This commit is contained in:
zimoun 2021-03-15 19:08:59 +01:00 committed by Ricardo Wurmus
parent 457de7f401
commit 16c7e79ebb
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2 changed files with 29 additions and 29 deletions
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29
gnu/packages/bioconductor.scm
View file

@ -1538,6 +1538,35 @@ (define-public r-annotate
microarrays.")
(license license:artistic2.0)))
(define-public r-annotationdbi
(package
(name "r-annotationdbi")
(version "1.52.0")
(source (origin
(method url-fetch)
(uri (bioconductor-uri "AnnotationDbi" version))
(sha256
(base32
"0zqxgh3nx6y8ry12s2vss2f4axz5vpqxha1y4ifhhcx4zhpzsglr"))))
(properties
`((upstream-name . "AnnotationDbi")))
(build-system r-build-system)
(propagated-inputs
`(("r-biobase" ,r-biobase)
("r-biocgenerics" ,r-biocgenerics)
("r-dbi" ,r-dbi)
("r-iranges" ,r-iranges)
("r-rsqlite" ,r-rsqlite)
("r-s4vectors" ,r-s4vectors)))
(native-inputs
`(("r-knitr" ,r-knitr)))
(home-page "https://bioconductor.org/packages/AnnotationDbi")
(synopsis "Annotation database interface")
(description
"This package provides user interface and database connection code for
annotation data packages using SQLite data storage.")
(license license:artistic2.0)))
(define-public r-annotationforge
(package
(name "r-annotationforge")

29
gnu/packages/bioinformatics.scm
View file

@ -7691,35 +7691,6 @@ (define-public bio-vcf
(home-page "https://github.com/vcflib/bio-vcf")
(license license:expat)))
(define-public r-annotationdbi
(package
(name "r-annotationdbi")
(version "1.52.0")
(source (origin
(method url-fetch)
(uri (bioconductor-uri "AnnotationDbi" version))
(sha256
(base32
"0zqxgh3nx6y8ry12s2vss2f4axz5vpqxha1y4ifhhcx4zhpzsglr"))))
(properties
`((upstream-name . "AnnotationDbi")))
(build-system r-build-system)
(propagated-inputs
`(("r-biobase" ,r-biobase)
("r-biocgenerics" ,r-biocgenerics)
("r-dbi" ,r-dbi)
("r-iranges" ,r-iranges)
("r-rsqlite" ,r-rsqlite)
("r-s4vectors" ,r-s4vectors)))
(native-inputs
`(("r-knitr" ,r-knitr)))
(home-page "https://bioconductor.org/packages/AnnotationDbi")
(synopsis "Annotation database interface")
(description
"This package provides user interface and database connection code for
annotation data packages using SQLite data storage.")
(license license:artistic2.0)))
(define-public r-biomart
(package
(name "r-biomart")