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gnu: python-scipy: Use 'modify-phases' syntax.

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* gnu/packages/python.scm (python-scipy)[arguments]: Use 'modify-phases'.
This commit is contained in:
Marius Bakke 2017-01-19 16:59:28 +01:00
parent c8d7e063d0
commit 16ca6aaac8
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1 changed files with 50 additions and 54 deletions
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104
gnu/packages/python.scm
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@ -3946,13 +3946,18 @@ (define-public python-scipy
(outputs '("out" "doc"))
(arguments
`(#:phases
(alist-cons-before
'build 'configure-openblas
(lambda* (#:key inputs #:allow-other-keys)
(call-with-output-file "site.cfg"
(lambda (port)
(format port
"[blas]
(modify-phases %standard-phases
(add-after 'unpack 'fix-tests
(lambda _
(substitute* "scipy/integrate/tests/test_quadpack.py"
(("libm.so") "libm.so.6"))
#t)
(add-before 'build 'configure-openblas
(lambda* (#:key inputs #:allow-other-keys)
(call-with-output-file "site.cfg"
(lambda (port)
(format port
"[blas]
libraries = openblas
library_dirs = ~a/lib
include_dirs = ~a/include
@ -3962,53 +3967,44 @@ (define-public python-scipy
library_dirs = ~a/lib
atlas_libs = openblas
"
(assoc-ref inputs "openblas")
(assoc-ref inputs "openblas")
(assoc-ref inputs "openblas"))))
#t)
(alist-cons-after
'install 'install-doc
(lambda* (#:key inputs outputs #:allow-other-keys)
(let* ((data (string-append (assoc-ref outputs "doc") "/share"))
(doc (string-append data "/doc/" ,name "-" ,version))
(html (string-append doc "/html"))
(pyver ,(string-append "PYVER=")))
;; Make installed package available for building the
;; documentation
(add-installed-pythonpath inputs outputs)
(with-directory-excursion "doc"
;; Fix generation of images for mathematical expressions.
(substitute* (find-files "source" "conf\\.py")
(("pngmath_use_preview = True")
"pngmath_use_preview = False"))
(mkdir-p html)
(system* "make" "html" pyver)
(system* "make" "latex" "PAPER=a4" pyver)
(system* "make" "-C" "build/latex" "all-pdf" "PAPER=a4" pyver)
(copy-file "build/latex/scipy-ref.pdf"
(string-append doc "/scipy-ref.pdf"))
(with-directory-excursion "build/html"
(for-each (lambda (file)
(let* ((dir (dirname file))
(tgt-dir (string-append html "/" dir)))
(install-file file html)))
(find-files "." ".*"))))))
;; Tests can only be run after the library has been installed and not
;; within the source directory.
(alist-cons-after
'install 'check
(lambda _
(with-directory-excursion "/tmp"
(zero? (system* "python" "-c" "import scipy; scipy.test()"))))
(alist-delete
'check
(alist-cons-after
'unpack 'fix-tests
(lambda _
(substitute* "scipy/integrate/tests/test_quadpack.py"
(("libm.so") "libm.so.6"))
#t)
%standard-phases)))))))
(assoc-ref inputs "openblas")
(assoc-ref inputs "openblas")
(assoc-ref inputs "openblas"))))
#t)
(delete 'check)
(add-after 'install 'install-doc
(lambda* (#:key inputs outputs #:allow-other-keys)
(let* ((data (string-append (assoc-ref outputs "doc") "/share"))
(doc (string-append data "/doc/" ,name "-" ,version))
(html (string-append doc "/html"))
(pyver ,(string-append "PYVER=")))
;; Make installed package available for building the
;; documentation
(add-installed-pythonpath inputs outputs)
(with-directory-excursion "doc"
;; Fix generation of images for mathematical expressions.
(substitute* (find-files "source" "conf\\.py")
(("pngmath_use_preview = True")
"pngmath_use_preview = False"))
(mkdir-p html)
(system* "make" "html" pyver)
(system* "make" "latex" "PAPER=a4" pyver)
(system* "make" "-C" "build/latex" "all-pdf" "PAPER=a4" pyver)
(copy-file "build/latex/scipy-ref.pdf"
(string-append doc "/scipy-ref.pdf"))
(with-directory-excursion "build/html"
(for-each (lambda (file)
(let* ((dir (dirname file))
(tgt-dir (string-append html "/" dir)))
(install-file file html)))
(find-files "." ".*"))))
#t)))
(add-after 'install-doc 'check
(lambda _
;; Tests can only be run after the library has been installed and not
;; within the source directory.
(with-directory-excursion "/tmp"
(zero? (system* "python" "-c" "import scipy; scipy.test()"))))))))))
(home-page "http://www.scipy.org/")
(synopsis "The Scipy library provides efficient numerical routines")
(description "The SciPy library is one of the core packages that make up