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gnu: mantis: Update to 0.1-2.b6979a2.

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* gnu/packages/bioinformatics.scm (mantis): Update to 0.1-2.b6979a2.
[arguments]: Disable the use of SSE4.2 instructions.
[native-inputs]: Build with GCC 7.
This commit is contained in:
Ricardo Wurmus 2021-12-08 12:46:33 +01:00
parent 738f22fa06
commit 1f7c06965c
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1 changed files with 10 additions and 5 deletions
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gnu/packages/bioinformatics.scm
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@ -11337,11 +11337,12 @@ (define-public genrich
(license license:expat))) (license license:expat)))
(define-public mantis (define-public mantis
(let ((commit "4ffd171632c2cb0056a86d709dfd2bf21bc69b84") ;; This is an arbitrary commit as a year has passed since 0.1 was tagged.
(revision "1")) (let ((commit "b6979a269172a45201c8366680d8b889f889432b")
(revision "2"))
(package (package
(name "mantis") (name "mantis")
(version (git-version "0" revision commit)) (version (git-version "0.1" revision commit))
(source (origin (source (origin
(method git-fetch) (method git-fetch)
(uri (git-reference (uri (git-reference
@ -11350,13 +11351,17 @@ (define-public mantis
(file-name (git-file-name name version)) (file-name (git-file-name name version))
(sha256 (sha256
(base32 (base32
"0iqbr0dhmlc8mzpirmm2s4pkzkwdgrcx50yx6cv3wlr2qi064p55")))) "0dq8a785hnaxx5kq757m5czs8xpcjpcph1inq2nm8h6zfvqyj8xs"))))
(build-system cmake-build-system) (build-system cmake-build-system)
(arguments '(#:tests? #f)) ; there are none (arguments
'(#:tests? #f ; there are none
#:configure-flags (list "-DNH=ON"))) ; do not use SSE4.2 instructions
(inputs (inputs
`(("sdsl-lite" ,sdsl-lite) `(("sdsl-lite" ,sdsl-lite)
("openssl" ,openssl) ("openssl" ,openssl)
("zlib" ,zlib))) ("zlib" ,zlib)))
(native-inputs
`(("gcc" ,gcc-7)))
(home-page "https://github.com/splatlab/mantis") (home-page "https://github.com/splatlab/mantis")
(synopsis "Large-scale sequence-search index data structure") (synopsis "Large-scale sequence-search index data structure")
(description "Mantis is a space-efficient data structure that can be (description "Mantis is a space-efficient data structure that can be