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gnu: Add r-annotationhubdata.
* gnu/packages/bioconductor.scm (r-annotationhubdata): New variable. Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
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@ -2707,6 +2707,57 @@ (define-public r-animalcules
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to understand their data better and discover new insights.")
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(license license:artistic2.0)))
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(define-public r-annotationhubdata
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(package
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(name "r-annotationhubdata")
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(version "1.28.0")
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(source
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(origin
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(method url-fetch)
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(uri (bioconductor-uri "AnnotationHubData" version))
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(sha256
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(base32 "0mcx09kcxccw2gkf4c3w7sxgb7v3gwbvahvx9wgq8f93q85yzg95"))))
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(properties `((upstream-name . "AnnotationHubData")))
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(build-system r-build-system)
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(arguments
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(list
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#:phases
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'(modify-phases %standard-phases
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(add-before 'install 'set-home
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(lambda _ (setenv "HOME" "/tmp"))))))
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(propagated-inputs
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(list r-annotationdbi
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r-annotationforge
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r-annotationhub
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r-biobase
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r-bioccheck
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r-biocgenerics
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r-biocmanager
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r-biocviews
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r-biostrings
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r-dbi
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r-futile-logger
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r-genomeinfodb
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r-genomicfeatures
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r-genomicranges
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r-graph
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r-iranges
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r-jsonlite
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r-organismdbi
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r-rcurl
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r-rsamtools
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r-rsqlite
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r-rtracklayer
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r-s4vectors
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r-xml))
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(native-inputs (list r-knitr))
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(home-page "https://bioconductor.org/packages/AnnotationHubData")
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(synopsis "Transform public data resources into Bioconductor data structures")
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(description
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"This package provides tools to acquire, annotate, convert and store data
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for use in Bioconductor’s AnnotationHub.")
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(license license:artistic2.0)))
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(define-public r-anvil
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(package
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(name "r-anvil")
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