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gnu: Add r-icobra.
* gnu/packages/bioconductor.scm (r-icobra): New variable.
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@ -1898,3 +1898,37 @@ (define-public r-ihw
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informative on the statistical properties of each hypothesis test, while it is
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informative on the statistical properties of each hypothesis test, while it is
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independent of the p-value under the null hypothesis.")
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independent of the p-value under the null hypothesis.")
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(license license:artistic2.0)))
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(license license:artistic2.0)))
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(define-public r-icobra
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(package
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(name "r-icobra")
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(version "1.10.0")
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(source
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(origin
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(method url-fetch)
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(uri (bioconductor-uri "iCOBRA" version))
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(sha256
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(base32
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"0i1swrm31g0zffi5pm48bfvdfqpd32d0zdchkbyipz96al46jnld"))))
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(properties `((upstream-name . "iCOBRA")))
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(build-system r-build-system)
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(propagated-inputs
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`(("r-dplyr" ,r-dplyr)
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("r-dt" ,r-dt)
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("r-ggplot2" ,r-ggplot2)
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("r-limma" ,r-limma)
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("r-reshape2" ,r-reshape2)
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("r-rocr" ,r-rocr)
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("r-scales" ,r-scales)
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("r-shiny" ,r-shiny)
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("r-shinybs" ,r-shinybs)
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("r-shinydashboard" ,r-shinydashboard)
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("r-upsetr" ,r-upsetr)))
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(home-page "https://bioconductor.org/packages/iCOBRA")
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(synopsis "Comparison and visualization of ranking and assignment methods")
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(description
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"This package provides functions for calculation and visualization of
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performance metrics for evaluation of ranking and binary
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classification (assignment) methods. It also contains a Shiny application for
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interactive exploration of results.")
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(license license:gpl2+)))
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