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gnu: Add r-rsubread.

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* gnu/packages/bioconductor.scm (r-rsubread): New variable.
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Ricardo Wurmus 2019-06-26 15:51:55 +02:00
parent 536dcafbf9
commit 2cb738a6ad
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gnu/packages/bioconductor.scm
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@ -4745,3 +4745,27 @@ (define-public r-annotatr
visualize the intersection of genomic sites/regions with genomic
annotations.")
(license license:gpl3)))
(define-public r-rsubread
(package
(name "r-rsubread")
(version "1.34.2")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "Rsubread" version))
(sha256
(base32
"0bsrw61wcav0q22c5m6gr0vn1f3c3ld8gxj730wcab6dj196z6q3"))))
(properties `((upstream-name . "Rsubread")))
(build-system r-build-system)
(inputs `(("zlib" ,zlib)))
(home-page "https://bioconductor.org/packages/Rsubread/")
(synopsis "Subread sequence alignment and counting for R")
(description
"This package provides tools for alignment, quantification and analysis
of second and third generation sequencing data. It includes functionality for
read mapping, read counting, SNP calling, structural variant detection and
gene fusion discovery. It can be applied to all major sequencing techologies
and to both short and long sequence reads.")
(license license:gpl3)))