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gnu: Add r-rsubread.
* gnu/packages/bioconductor.scm (r-rsubread): New variable.
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@ -4745,3 +4745,27 @@ (define-public r-annotatr
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visualize the intersection of genomic sites/regions with genomic
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visualize the intersection of genomic sites/regions with genomic
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annotations.")
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annotations.")
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(license license:gpl3)))
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(license license:gpl3)))
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(define-public r-rsubread
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(package
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(name "r-rsubread")
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(version "1.34.2")
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(source
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(origin
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(method url-fetch)
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(uri (bioconductor-uri "Rsubread" version))
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(sha256
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(base32
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"0bsrw61wcav0q22c5m6gr0vn1f3c3ld8gxj730wcab6dj196z6q3"))))
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(properties `((upstream-name . "Rsubread")))
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(build-system r-build-system)
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(inputs `(("zlib" ,zlib)))
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(home-page "https://bioconductor.org/packages/Rsubread/")
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(synopsis "Subread sequence alignment and counting for R")
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(description
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"This package provides tools for alignment, quantification and analysis
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of second and third generation sequencing data. It includes functionality for
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read mapping, read counting, SNP calling, structural variant detection and
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gene fusion discovery. It can be applied to all major sequencing techologies
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and to both short and long sequence reads.")
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(license license:gpl3)))
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