diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 044ad8f5bb..fcde611f5d 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -26484,27 +26484,15 @@ (define-public r-seuratobject (define-public r-seurat (package (name "r-seurat") - (version "4.0.0") + (version "4.0.1") (source (origin (method url-fetch) (uri (cran-uri "Seurat" version)) (sha256 (base32 - "1mp3py00bmzj4541d8ry5sfzkpfzvnl9dpa8n4qhakd13dl30xdn")))) + "17cmp9mimvykb8ny796dn1zwmvg0pwwjw1zcixyamc5q1lwnxi3p")))) (properties `((upstream-name . "Seurat"))) (build-system r-build-system) - ;; This is needed because r-spatstat has been split up and there has - ;; been no new release of Seurat since then. - (arguments - `(#:phases - (modify-phases %standard-phases - (add-after 'unpack 'fix-spatstat-import - (lambda _ - (substitute* "NAMESPACE" - (("importFrom\\(spatstat,markvario\\)") - "importFrom(spatstat.core,markvario)") - (("importFrom\\(spatstat,ppp\\)") - "importFrom(spatstat.geom,ppp)"))))))) (propagated-inputs `(("r-cluster" ,r-cluster) ("r-cowplot" ,r-cowplot) @@ -26545,7 +26533,8 @@ (define-public r-seurat ("r-sctransform" ,r-sctransform) ("r-seuratobject" ,r-seuratobject) ("r-shiny" ,r-shiny) - ("r-spatstat" ,r-spatstat) + ("r-spatstat-core" ,r-spatstat-core) + ("r-spatstat-geom" ,r-spatstat-geom) ("r-tibble" ,r-tibble) ("r-uwot" ,r-uwot))) (home-page "http://www.satijalab.org/seurat")