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gnu: Add r-bumphunter.

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* gnu/packages/bioconductor.scm (r-bumphunter): New variable.
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Ricardo Wurmus 2019-03-13 13:16:48 +01:00
parent f4eac09653
commit 34a24f95ec
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34
gnu/packages/bioconductor.scm
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@ -2200,3 +2200,37 @@ (define-public r-siggenes
both the Significance Analysis of Microarrays (SAM) and the @dfn{Empirical
Bayes Analyses of Microarrays} (EBAM).")
(license license:lgpl2.0+)))
(define-public r-bumphunter
(package
(name "r-bumphunter")
(version "1.24.5")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "bumphunter" version))
(sha256
(base32
"1f9vk3srffbx8jpza40nd18a4y0p0z8q40mx55dlcnddkwrqi19b"))))
(build-system r-build-system)
(propagated-inputs
`(("r-annotationdbi" ,r-annotationdbi)
("r-biocgenerics" ,r-biocgenerics)
("r-dorng" ,r-dorng)
("r-foreach" ,r-foreach)
("r-genomeinfodb" ,r-genomeinfodb)
("r-genomicfeatures" ,r-genomicfeatures)
("r-genomicranges" ,r-genomicranges)
("r-iranges" ,r-iranges)
("r-iterators" ,r-iterators)
("r-limma" ,r-limma)
("r-locfit" ,r-locfit)
("r-matrixstats" ,r-matrixstats)
("r-s4vectors" ,r-s4vectors)))
(home-page "https://github.com/ririzarr/bumphunter")
(synopsis "Find bumps in genomic data")
(description
"This package provides tools for finding bumps in genomic data in order
to identify differentially methylated regions in epigenetic epidemiology
studies.")
(license license:artistic2.0)))