diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 5fdf7f29d6..0fe0624aff 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -12747,7 +12747,7 @@ (define-public pigx-rnaseq (define-public pigx-chipseq (package (name "pigx-chipseq") - (version "0.0.9") + (version "0.0.10") (source (origin (method url-fetch) (uri (string-append "https://github.com/BIMSBbioinfo/pigx_chipseq/" @@ -12755,7 +12755,7 @@ (define-public pigx-chipseq "/pigx_chipseq-" version ".tar.gz")) (sha256 (base32 - "14ym5fmc16xil584jlhf66ldq38smb6jbcfwnjvqmi7v0vzybdsw")))) + "13w99bkr0w4j28ms0yzpl1x6fkpdqay0vh495q3x20bcilsjwnf1")))) (build-system gnu-build-system) (arguments `(#:tests? #f ; parts of the tests rely on access to the network @@ -12774,22 +12774,30 @@ (define-public pigx-chipseq ("coreutils" ,coreutils) ("r-minimal" ,r-minimal) ("r-argparser" ,r-argparser) + ("r-biocparallel" ,r-biocparallel) + ("r-biostrings" ,r-biostrings) ("r-chipseq" ,r-chipseq) ("r-data-table" ,r-data-table) + ("r-dplyr" ,r-dplyr) ("r-genomation" ,r-genomation) + ("r-genomicalignments" ,r-genomicalignments) ("r-genomicranges" ,r-genomicranges) + ("r-rsamtools" ,r-rsamtools) ("r-rtracklayer" ,r-rtracklayer) - ("r-rcas" ,r-rcas) + ("r-s4vectors" ,r-s4vectors) ("r-stringr" ,r-stringr) + ("r-tibble" ,r-tibble) + ("r-tidyr" ,r-tidyr) ("r-jsonlite" ,r-jsonlite) ("r-heatmaply" ,r-heatmaply) + ("r-htmlwidgets" ,r-htmlwidgets) ("r-ggplot2" ,r-ggplot2) ("r-plotly" ,r-plotly) + ("r-rmarkdown" ,r-rmarkdown) ("python-wrapper" ,python-wrapper) - ("python-magic" ,python-magic) ("python-pyyaml" ,python-pyyaml) + ("python-magic" ,python-magic) ("python-xlrd" ,python-xlrd) - ("snakemake" ,snakemake) ("trim-galore" ,trim-galore) ("macs" ,macs) ("multiqc" ,multiqc)