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gnu: Add r-apeglm.

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* gnu/packages/bioconductor.scm (r-apeglm): New variable.
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Roel Janssen 2020-11-18 16:25:46 +01:00 committed by Ricardo Wurmus
parent a0df9b93ef
commit 3b399e514f
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1 changed files with 27 additions and 0 deletions
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27
gnu/packages/bioconductor.scm
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@ -1630,6 +1630,33 @@ (define r-rcppnumerical
integration with @code{Rcpp}.")
(license license:gpl2+)))
(define-public r-apeglm
(package
(name "r-apeglm")
(version "1.12.0")
(source (origin
(method url-fetch)
(uri (bioconductor-uri "apeglm" version))
(sha256
(base32
"0pix1fhxk2q89p2745fgsmxwics9rf10l392qhw3rw6v6ynhims2"))))
(properties `((upstream-name . "apeglm")))
(build-system r-build-system)
(propagated-inputs
`(("r-emdbook" ,r-emdbook)
("r-genomicranges" ,r-genomicranges)
("r-rcpp" ,r-rcpp)
("r-rcppeigen" ,r-rcppeigen)
("r-rcppnumerical" ,r-rcppnumerical)
("r-summarizedexperiment" ,r-summarizedexperiment)))
(native-inputs `(("r-knitr" ,r-knitr)))
(home-page "https://bioconductor.org/packages/apeglm")
(synopsis "Approximate posterior estimation for GLM coefficients")
(description "This package provides Bayesian shrinkage estimators for
effect sizes for a variety of GLM models, using approximation of the
posterior for individual coefficients.")
(license license:gpl2)))
(define-public r-diffbind
(package
(name "r-diffbind")