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gnu: Add biosoup.
* gnu/packages/bioinformatics.scm (biosoup): New variable.
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@ -1323,6 +1323,37 @@ (define-public python-fastalite
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(define-public python2-fastalite
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(package-with-python2 python-fastalite))
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(define-public biosoup
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(package
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(name "biosoup")
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(version "0.10.0")
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(source
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(origin
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(method git-fetch)
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(uri (git-reference
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(url "https://github.com/rvaser/biosoup")
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;; Corresponds to version 0.10.0
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(commit "38181f09854ff42cbd9632200a2ec9fb37a4b7b6")))
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(file-name (git-file-name name version))
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(sha256
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(base32
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"02hvyka703zagx0nvv2yx3dkc748zc8g6qbrpya7r8kfkcl7y8hw"))))
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(build-system cmake-build-system)
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(arguments
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`(#:phases
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(modify-phases %standard-phases
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(replace 'check
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(lambda* (#:key tests? #:allow-other-keys)
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(when tests?
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(invoke "./bin/biosoup_test")))))))
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(native-inputs
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`(("googletest" ,googletest)))
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(home-page "https://github.com/rvaser/biosoup")
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(synopsis "C++ support library for bioinformatics tools")
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(description "Biosoup is a C++ collection of header-only data structures
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used for storage and logging in bioinformatics tools.")
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(license license:expat)))
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(define-public ciri-long
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(package
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(name "ciri-long")
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