From 437bc4dda9a6bba75372d281e38bcead8dfb3998 Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Sat, 13 Jun 2020 00:13:59 +0200 Subject: [PATCH] gnu: r-inspect: Update to 1.18.0. * gnu/packages/bioconductor.scm (r-inspect): Update to 1.18.0. [propagated-inputs]: Add r-rtracklayer. [native-inputs]: Add r-knitr. --- gnu/packages/bioconductor.scm | 7 +++++-- 1 file changed, 5 insertions(+), 2 deletions(-) diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index acc489b8b3..cfe73f20bf 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -2272,14 +2272,14 @@ (define-public r-plgem (define-public r-inspect (package (name "r-inspect") - (version "1.16.3") + (version "1.18.0") (source (origin (method url-fetch) (uri (bioconductor-uri "INSPEcT" version)) (sha256 (base32 - "0y4gpvrbmcipdnyz9lz9ywn0317xnpcriiisqvxygin05vgcpilp")))) + "1yyglkdc3ww2jzswhcxk9g1imydfm39krl87as5l9fbm7mv3vd4z")))) (properties `((upstream-name . "INSPEcT"))) (build-system r-build-system) (propagated-inputs @@ -2299,11 +2299,14 @@ (define-public r-inspect ("r-proc" ,r-proc) ("r-rootsolve" ,r-rootsolve) ("r-rsamtools" ,r-rsamtools) + ("r-rtracklayer" ,r-rtracklayer) ("r-s4vectors" ,r-s4vectors) ("r-shiny" ,r-shiny) ("r-summarizedexperiment" ,r-summarizedexperiment) ("r-txdb-mmusculus-ucsc-mm9-knowngene" ,r-txdb-mmusculus-ucsc-mm9-knowngene))) + (native-inputs + `(("r-knitr" ,r-knitr))) (home-page "https://bioconductor.org/packages/INSPEcT") (synopsis "Analysis of 4sU-seq and RNA-seq time-course data") (description