ryan77627/guix
1
0
Fork 0
mirror of https://git.in.rschanz.org/ryan77627/guix.git synced 2024-12-26 22:38:07 -05:00
Code Issues Projects Releases Packages Wiki Activity Actions

gnu: r-qtl: Move to (gnu packages cran).

Browse source 
* gnu/packages/bioinformatics.scm (r-qtl): Move from here...
* gnu/packages/cran.scm (r-qtl): ...to here.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
This commit is contained in:
zimoun 2020-09-11 20:08:42 +02:00 committed by Ricardo Wurmus
parent c23ff34423
commit 496a52dc41
No known key found for this signature in database
GPG key ID: 197A5888235FACAC
2 changed files with 26 additions and 25 deletions
Show stats Download patch file Download diff file Expand all files Collapse all files

25
gnu/packages/bioinformatics.scm
View file

@ -8510,31 +8510,6 @@ (define-public r-motifrg
throughput genetic sequencing data sets using regression methods.")
(license license:artistic2.0)))
(define-public r-qtl
(package
(name "r-qtl")
(version "1.46-2")
(source
(origin
(method url-fetch)
(uri (string-append "mirror://cran/src/contrib/qtl_"
version ".tar.gz"))
(sha256
(base32
"0rbwcnvyy96gq1dsgpxx03pv423qya26h6ws5y0blj3blfdmj83a"))))
(build-system r-build-system)
(home-page "https://rqtl.org/")
(synopsis "R package for analyzing QTL experiments in genetics")
(description "R/qtl is an extension library for the R statistics
system. It is used to analyze experimental crosses for identifying
genes contributing to variation in quantitative traits (so-called
quantitative trait loci, QTLs).
Using a hidden Markov model, R/qtl estimates genetic maps, to
identify genotyping errors, and to perform single-QTL and two-QTL,
two-dimensional genome scans.")
(license license:gpl3)))
(define-public r-qtl2
(package
(name "r-qtl2")

26
gnu/packages/cran.scm
View file

@ -1,6 +1,7 @@
;;; GNU Guix --- Functional package management for GNU
;;; Copyright © 2015, 2016, 2017, 2018, 2019, 2020 Ricardo Wurmus <rekado@elephly.net>
;;; Copyright © 2015 Andreas Enge <andreas@enge.fr>
;;; Copyright © 2015, 2016 Pjotr Prins <pjotr.guix@thebird.nl>
;;; Copyright © 2016, 2017 Ben Woodcroft <donttrustben@gmail.com>
;;; Copyright © 2016, 2017, 2018, 2020 Roel Janssen <roel@gnu.org>
;;; Copyright © 2017, 2018, 2019, 2020 Tobias Geerinckx-Rice <me@tobias.gr>
@ -24330,3 +24331,28 @@ (define-public r-perm
covariate (usually group indicator) and the scores.")
;; Any version of the GPL
(license license:gpl2+)))
(define-public r-qtl
(package
(name "r-qtl")
(version "1.46-2")
(source
(origin
(method url-fetch)
(uri (string-append "mirror://cran/src/contrib/qtl_"
version ".tar.gz"))
(sha256
(base32
"0rbwcnvyy96gq1dsgpxx03pv423qya26h6ws5y0blj3blfdmj83a"))))
(build-system r-build-system)
(home-page "https://rqtl.org/")
(synopsis "R package for analyzing QTL experiments in genetics")
(description "R/qtl is an extension library for the R statistics
system. It is used to analyze experimental crosses for identifying
genes contributing to variation in quantitative traits (so-called
quantitative trait loci, QTLs).
Using a hidden Markov model, R/qtl estimates genetic maps, to
identify genotyping errors, and to perform single-QTL and two-QTL,
two-dimensional genome scans.")
(license license:gpl3)))