ryan77627/guix
1
0
Fork 0
mirror of https://git.in.rschanz.org/ryan77627/guix.git synced 2025-01-26 20:49:29 -05:00
Code Issues Projects Releases Packages Wiki Activity Actions

gnu: Add python-scrublet.

Browse source 
* gnu/packages/bioinformatics.scm (python-scrublet): New variable.
This commit is contained in:
Navid Afkhami 2023-02-09 09:12:34 +01:00 committed by Ricardo Wurmus
parent 43ee3e1da2
commit 4d35a5e2b6
No known key found for this signature in database
GPG key ID: 197A5888235FACAC
1 changed files with 29 additions and 0 deletions
Show stats Download patch file Download diff file Expand all files Collapse all files

29
gnu/packages/bioinformatics.scm
View file

@ -3459,6 +3459,35 @@ (define-public python-scikit-bio
resources for bioinformatics.")
(license license:bsd-3)))
(define-public python-scrublet
(package
(name "python-scrublet")
(version "0.2.3")
(source (origin
(method url-fetch)
(uri (pypi-uri "scrublet" version))
(sha256
(base32
"0fk5pwk12yz9wpvwkl6j2l2g28f3x35b9r9n5bw6f0i9f0qgd191"))))
(build-system pyproject-build-system)
(arguments '(#:tests? #false)) ;there are none
(propagated-inputs
(list python-annoy
python-cython
python-matplotlib
python-numba
python-numpy
python-pandas
python-scikit-image
python-scikit-learn
python-scipy
python-umap-learn))
(home-page "https://github.com/swolock/scrublet")
(synopsis "Tool to indentify and remove doublets in single-cell data")
(description "This package provides a tool for identifying and removing
doublets in single-cell RNA-seq data.")
(license license:expat)))
(define-public cwltool
(package
(name "cwltool")