mirror of
https://git.in.rschanz.org/ryan77627/guix.git
synced 2025-01-28 14:01:29 -05:00
gnu: Add r-arraymvout.
* gnu/packages/bioconductor.scm (r-arraymvout): New variable.
This commit is contained in:
parent
4221c3d4da
commit
4edacf416b
1 changed files with 36 additions and 0 deletions
|
@ -3516,6 +3516,42 @@ (define-public r-arrayqualitymetrics
|
||||||
supported.")
|
supported.")
|
||||||
(license license:lgpl2.0+)))
|
(license license:lgpl2.0+)))
|
||||||
|
|
||||||
|
(define-public r-arraymvout
|
||||||
|
(package
|
||||||
|
(name "r-arraymvout")
|
||||||
|
(version "1.58.0")
|
||||||
|
(source
|
||||||
|
(origin
|
||||||
|
(method url-fetch)
|
||||||
|
(uri (bioconductor-uri "arrayMvout" version))
|
||||||
|
(sha256
|
||||||
|
(base32 "1wdqcfa0h070lky4m2h5k4wg8lg7014y0gk95gip5zags29zjwqb"))))
|
||||||
|
(properties `((upstream-name . "arrayMvout")))
|
||||||
|
(build-system r-build-system)
|
||||||
|
(arguments
|
||||||
|
(list
|
||||||
|
#:phases
|
||||||
|
'(modify-phases %standard-phases
|
||||||
|
(add-before 'install 'change-home-dir
|
||||||
|
(lambda _
|
||||||
|
;; Change from /homeless-shelter to /tmp for write permission.
|
||||||
|
(setenv "HOME" "/tmp"))))))
|
||||||
|
(propagated-inputs
|
||||||
|
(list r-affy
|
||||||
|
r-affycontam
|
||||||
|
r-biobase
|
||||||
|
r-lumi
|
||||||
|
r-mdqc
|
||||||
|
r-parody))
|
||||||
|
(home-page "https://bioconductor.org/packages/arrayMvout")
|
||||||
|
(synopsis "Multivariate outlier detection for expression array QA")
|
||||||
|
(description
|
||||||
|
"This package supports the application of diverse quality metrics to
|
||||||
|
AffyBatch instances, summarizing these metrics via PCA, and then performing
|
||||||
|
parametric outlier detection on the PCs to identify aberrant arrays with a
|
||||||
|
fixed Type I error rate.")
|
||||||
|
(license license:artistic2.0)))
|
||||||
|
|
||||||
(define-public r-asafe
|
(define-public r-asafe
|
||||||
(package
|
(package
|
||||||
(name "r-asafe")
|
(name "r-asafe")
|
||||||
|
|
Loading…
Reference in a new issue