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gnu: Add python-arviz.
* gnu/packages/statistics.scm (python-arviz): New variable.
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@ -2125,6 +2125,54 @@ (define-public python-hdmedians
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machine learning, computer vision, and high-dimensional statistics.")
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(license license:asl2.0)))
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(define-public python-arviz
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(package
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(name "python-arviz")
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(version "0.15.1")
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(source (origin
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(method git-fetch) ; PyPI misses some test files
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(uri (git-reference
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(url "https://github.com/arviz-devs/arviz")
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(commit (string-append "v" version))))
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(file-name (git-file-name name version))
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(sha256
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(base32
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"0nqr4v927r9kc50z7rwlk2m8nw3dnnmmwmwcfijzd93gbg53wc4f"))))
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(build-system pyproject-build-system)
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(arguments
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;; FIXME: matplotlib tests fail because of the "--save" test flag.
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(list #:test-flags #~'("--ignore"
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"arviz/tests/base_tests/test_plots_matplotlib.py")
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#:phases
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#~(modify-phases %standard-phases
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(add-after 'unpack 'remove-radon
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(lambda _
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(delete-file
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;; This dataset is loaded remotely, it's not supposed to
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;; be copied locally.
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"arviz/data/example_data/code/radon/radon.json")))
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(add-before 'check 'write-permission
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(lambda _
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;; 3 tests require write permission.
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(setenv "HOME" "/tmp"))))))
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(native-inputs (list python-cloudpickle python-pytest))
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(propagated-inputs (list python-h5netcdf
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python-matplotlib
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python-numpy
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python-packaging
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python-pandas
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python-scipy
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python-typing-extensions
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python-xarray
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python-xarray-einstats))
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(home-page "https://github.com/arviz-devs/arviz")
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(synopsis "Exploratory analysis of Bayesian models")
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(description
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"ArviZ is a Python package for exploratory analysis of Bayesian models.
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It includes functions for posterior analysis, data storage, model checking,
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comparison and diagnostics.")
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(license license:asl2.0)))
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(define-public python-patsy
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(package
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(name "python-patsy")
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