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gnu: Add python-graph-tool.

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* gnu/packages/graph.scm (python-graph-tool): New variable.

Signed-off-by: Marius Bakke <marius@gnu.org>
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Alexandre Hannud Abdo 2021-05-14 22:47:30 +02:00 committed by Marius Bakke
parent c5c977b5ea
commit 5b359e4ba5
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61
gnu/packages/graph.scm
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@ -7,6 +7,7 @@
;;; Copyright © 2020 Alexander Krotov <krotov@iitp.ru>
;;; Copyright © 2020 Pierre Langlois <pierre.langlos@gmx.com>
;;; Copyright © 2021 Vinicius Monego <monego@posteo.net>
;;; Copyright © 2021 Alexandre Hannud Abdo <abdo@member.fsf.org>
;;;
;;; This file is part of GNU Guix.
;;;
@ -38,13 +39,18 @@ (define-module (gnu packages graph)
#:use-module (gnu packages autotools)
#:use-module (gnu packages bioconductor)
#:use-module (gnu packages bioinformatics)
#:use-module (gnu packages boost)
#:use-module (gnu packages check)
#:use-module (gnu packages compression)
#:use-module (gnu packages cran)
#:use-module (gnu packages datastructures)
#:use-module (gnu packages gd)
#:use-module (gnu packages graphics)
#:use-module (gnu packages graphviz)
#:use-module (gnu packages gtk)
#:use-module (gnu packages maths)
#:use-module (gnu packages multiprecision)
#:use-module (gnu packages ncurses)
#:use-module (gnu packages pkg-config)
#:use-module (gnu packages python)
#:use-module (gnu packages python-science)
@ -532,3 +538,58 @@ (define-public mscgen
text language that is clear to create, edit and understand, which can also be
transformed into common image formats for display or printing.")
(license license:gpl2+)))
(define-public python-graph-tool
(package
(name "python-graph-tool")
(version "2.37")
(source (origin
(method url-fetch)
(uri (string-append
"https://downloads.skewed.de/graph-tool/graph-tool-"
version ".tar.bz2"))
(sha256
(base32
"0w2i4d4zyk051zkykcg0ksngspajznwmp523hbsx50xnxc6jliyz"))))
(build-system gnu-build-system)
(arguments
`(#:configure-flags
(list (string-append "--with-boost="
(assoc-ref %build-inputs "boost"))
(string-append "--with-python-module-path="
(assoc-ref %outputs "out")
"/lib/python"
,(version-major+minor
(package-version
(car (assoc-ref
(package-inputs this-package)
"python"))))
"/site-packages/"))))
(native-inputs
`(("pkg-config" ,pkg-config)
("gcc-10" ,gcc-10)
("ncurses" ,ncurses)))
(inputs
`(("python" ,python-wrapper)
("boost" ,boost)
("expat" ,expat)
("gmp" ,gmp)
("cgal" ,cgal)
("sparsehash" ,sparsehash)
("gtk+" ,gtk+)
("cairomm" ,cairomm)))
(propagated-inputs
`(("python-scipy" ,python-scipy)
("python-numpy" ,python-numpy)
("python-pycairo" ,python-pycairo)
("python-matplotlib" ,python-matplotlib)))
(synopsis "Manipulate and analyze graphs with Python efficiently")
(description "Graph-tool is an efficient Python module for manipulation
and statistical analysis of graphs (a.k.a. networks). Contrary to most other
Python modules with similar functionality, the core data structures and
algorithms are implemented in C++, making extensive use of template
metaprogramming, based heavily on the Boost Graph Library. This confers it a
level of performance that is comparable (both in memory usage and computation
time) to that of a pure C/C++ library.")
(home-page "https://graph-tool.skewed.de/")
(license license:lgpl3+)))