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gnu: Remove python-setuptools and python2-setuptools from inputs (part 4a)
This patch contains the changes for all modules beside python.scm where setuptools are used in an inherited package and removing this input also removes the need for inheriting the package. This is the case if adding setuptools in the inherited package was the only change. Change this to not inherit and remove the new needless call to "strip-python2-variant (if applicable). * gnu/packages/bioinformatics.scm (python-biopython, python2-biopython, python-twobitreader, python2-twobitreader, python-plastid, python2-plastid, python2-pybigwig, python2-screed, sra-tools): No longer "inherit" Python 2 packages inheriting from a Python 3 package if the sole reason for inheriting was adding python-setuptools respective python2-setuptools to [inputs], [native-inputs] or [propagated-inputs]. Remove now needless [properties] "python2-variant" where applicable. * gnu/packages/django.scm (python-pytest-django, python2-pytest-django, python-django-filter, python2-django-filter): Likewise. * gnu/packages/gnupg.scm (python2-pygpgme): Likewise. * gnu/packages/mail.scm (python-mailmanclient, python2-mailmanclient): Likewise. * gnu/packages/mpd.scm (python-msp, python2-mpd2): Likewise. * gnu/packages/music.scm (python-pylast, python2-pylast): Likewise. * gnu/packages/openstack.scm (python-requests-mock, python2-requests-mock, python2-git-review): Likewise. * gnu/packages/password-utils.scm (python2-bcrypt): Likewise. * gnu/packages/protobuf.scm (python-protobuf, python2-protobuf): Likewise. * gnu/packages/statistics.scm (python-patsy, python2-patsy): Likewise. * gnu/packages/web.scm (python2-feedparser): Likewise.
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11 changed files with 23 additions and 105 deletions
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@ -680,15 +680,10 @@ (define-public python-biopython
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common operations on them; code to perform data classification; code for
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dealing with alignments; code making it easy to split up parallelizable tasks
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into separate processes; and more.")
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(license (license:non-copyleft "http://www.biopython.org/DIST/LICENSE"))
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(properties `((python2-variant . ,(delay python2-biopython))))))
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(license (license:non-copyleft "http://www.biopython.org/DIST/LICENSE"))))
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(define-public python2-biopython
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(let ((base (package-with-python2 (strip-python2-variant python-biopython))))
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(package
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(inherit base)
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(native-inputs `(("python2-setuptools" ,python2-setuptools)
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,@(package-native-inputs base))))))
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(package-with-python2 python-biopython))
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;; An outdated version of biopython is required for seqmagick, see
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;; https://github.com/fhcrc/seqmagick/issues/59
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@ -1427,7 +1422,6 @@ (define-public python-twobitreader
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(sha256
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(base32
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"1q8wnj2kga9nz1lwc4w7qv52smfm536hp6mc8w6s53lhyj0mpi22"))))
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(properties `((python2-variant . ,(delay python2-twobitreader))))
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(build-system python-build-system)
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(arguments
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'(;; Tests are not distributed in the PyPi release.
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@ -1444,11 +1438,7 @@ (define-public python-twobitreader
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(license license:artistic2.0)))
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(define-public python2-twobitreader
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(let ((base (package-with-python2 (strip-python2-variant python-twobitreader))))
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(package
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(inherit base)
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(native-inputs `(("python2-setuptools" ,python2-setuptools)
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,@(package-native-inputs base))))))
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(package-with-python2 python-twobitreader))
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(define-public python-plastid
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(package
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@ -1460,7 +1450,6 @@ (define-public python-plastid
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(sha256
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(base32
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"1sqkz5d3b9kf688mp7k771c87ins42j7j0whmkb49cb3fsg8s8lj"))))
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(properties `((python2-variant . ,(delay python2-plastid))))
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(build-system python-build-system)
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(arguments
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;; Some test files are not included.
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@ -1485,12 +1474,7 @@ (define-public python-plastid
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(license license:bsd-3)))
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(define-public python2-plastid
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(let ((base (package-with-python2 (strip-python2-variant python-plastid))))
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(package
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(inherit base)
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;; setuptools is required at runtime
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(propagated-inputs `(("python2-setuptools" ,python2-setuptools)
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,@(package-propagated-inputs base))))))
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(package-with-python2 python-plastid))
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(define-public cd-hit
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(package
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@ -1939,10 +1923,7 @@ (define-public python-pybigwig
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(license license:expat)))
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(define-public python2-pybigwig
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(let ((pybigwig (package-with-python2 python-pybigwig)))
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(package (inherit pybigwig)
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(native-inputs
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`(("python-setuptools" ,python2-setuptools))))))
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(package-with-python2 python-pybigwig))
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(define-public python-dendropy
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(package
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@ -4568,11 +4549,7 @@ (define-public python-screed
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(license license:bsd-3)))
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(define-public python2-screed
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(let ((base (package-with-python2 (strip-python2-variant python-screed))))
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(package
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(inherit base)
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(native-inputs `(("python2-setuptools" ,python2-setuptools)
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,@(package-native-inputs base))))))
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(package-with-python2 python-screed))
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(define-public sra-tools
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(package
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@ -148,16 +148,10 @@ (define-public python-pytest-django
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(synopsis "Django plugin for py.test")
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(description "Pytest-django is a plugin for py.test that provides a set of
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useful tools for testing Django applications and projects.")
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(properties `((python2-variant . ,(delay python2-pytest-django))))
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(license license:bsd-3)))
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(define-public python2-pytest-django
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(let ((base (package-with-python2
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(strip-python2-variant python-pytest-django))))
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(package (inherit base)
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(native-inputs
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`(("python2-setuptools" ,python2-setuptools)
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,@(package-native-inputs base))))))
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(package-with-python2 python-pytest-django))
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(define-public python-django-filter
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(package
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@ -180,13 +174,7 @@ (define-public python-django-filter
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some of the more mundane bits of view code. Specifically, it allows users to
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filter down a queryset based on a model’s fields, displaying the form to let
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them do this.")
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(properties `((python2-variant . ,(delay python2-django-filter))))
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(license license:bsd-3)))
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(define-public python2-django-filter
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(let ((base (package-with-python2
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(strip-python2-variant python-django-filter))))
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(package (inherit base)
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(native-inputs
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`(("python2-setuptools" ,python2-setuptools)
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,@(package-native-inputs base))))))
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(package-with-python2 python-django-filter))
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@ -417,12 +417,7 @@ (define-public python-pygpgme
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(license license:lgpl2.1+)))
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(define-public python2-pygpgme
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(let ((base (package-with-python2 python-pygpgme)))
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(package
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(inherit base)
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(native-inputs
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`(("python2-setuptools" ,python2-setuptools)
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,@(package-native-inputs base))))))
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(package-with-python2 python-pygpgme))
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(define-public python-gnupg
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(package
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@ -1741,12 +1741,7 @@ (define-public python-mailmanclient
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(description
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"The mailmanclient library provides official Python bindings for
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the GNU Mailman 3 REST API.")
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(properties `((python2-variant . ,(delay python2-mailmanclient))))
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(license lgpl3+)))
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(define-public python2-mailmanclient
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(let ((base (package-with-python2
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(strip-python2-variant python-mailmanclient))))
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(package (inherit base)
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(native-inputs
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`(("python2-setuptools" ,python2-setuptools))))))
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(package-with-python2 python-mailmanclient))
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@ -257,15 +257,10 @@ (define-public python-mpd2
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(synopsis "Python MPD client library")
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(description "Python-mpd2 is a Python library which provides a client
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interface for the Music Player Daemon.")
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(license license:lgpl3+)
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(properties `((python2-variant . ,(delay python2-mpd2))))))
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(license license:lgpl3+)))
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(define-public python2-mpd2
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(let ((mpd2 (package-with-python2
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(strip-python2-variant python-mpd2))))
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(package (inherit mpd2)
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(native-inputs `(("python2-setuptools" ,python2-setuptools)
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,@(package-native-inputs mpd2))))))
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(package-with-python2 python-mpd2))
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(define-public sonata
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(package
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@ -1829,16 +1829,10 @@ (define-public python-pylast
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(synopsis "Python interface to Last.fm and Libre.fm")
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(description "A Python interface to Last.fm and other API-compatible
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websites such as Libre.fm.")
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(license license:asl2.0)
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(properties `((python2-variant . ,(delay python2-pylast))))))
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(license license:asl2.0)))
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(define-public python2-pylast
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(let ((pylast (package-with-python2
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(strip-python2-variant python-pylast))))
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(package (inherit pylast)
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(native-inputs
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`(("python2-setuptools" ,python2-setuptools)
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,@(package-native-inputs pylast))))))
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(package-with-python2 python-pylast))
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(define-public beets
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(package
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@ -261,16 +261,10 @@ (define-public python-requests-mock
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(description
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"This module provides a building block to stub out the HTTP requests
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portions of your testing code.")
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(license asl2.0)
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(properties `((python2-variant . ,(delay python2-requests-mock))))))
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(license asl2.0)))
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(define-public python2-requests-mock
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(let ((base (package-with-python2
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(strip-python2-variant python-requests-mock))))
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(package (inherit base)
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(native-inputs
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`(("python2-setuptools" ,python2-setuptools)
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,@(package-native-inputs base))))))
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(package-with-python2 python-requests-mock))
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(define-public python-stevedore
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(package
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@ -808,8 +802,4 @@ (define-public python-git-review
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(license asl2.0)))
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(define-public python2-git-review
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(let ((base (package-with-python2 (strip-python2-variant python-git-review))))
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(package (inherit base)
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(native-inputs
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`(("python2-setuptools" ,python2-setuptools)
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,@(package-native-inputs base))))))
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(package-with-python2 python-git-review))
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@ -375,8 +375,4 @@ (define-public python-bcrypt
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(license license:asl2.0)))
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(define-public python2-bcrypt
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(let ((bcrypt (package-with-python2 python-bcrypt)))
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(package (inherit bcrypt)
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(native-inputs
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`(("python2-setuptools" ,python2-setuptools)
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,@(package-native-inputs bcrypt))))))
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(package-with-python2 python-bcrypt))
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@ -70,10 +70,7 @@ (define-public python-protobuf
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(description
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"Protocol buffers are a language-neutral, platform-neutral extensible
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mechanism for serializing structured data.")
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(license bsd-3)
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(properties `((python2-variant . ,(delay python2-protobuf))))))
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(license bsd-3)))
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(define-public python2-protobuf
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(package (inherit (package-with-python2
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(strip-python2-variant python-protobuf)))
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(native-inputs `(("python2-setuptools" ,python2-setuptools)))))
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(package-with-python2 python-protobuf))
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@ -1416,15 +1416,10 @@ (define-public python-patsy
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;; The majority of the code is distributed under BSD-2. The module
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;; patsy.compat contains code derived from the Python standard library,
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;; and is covered by the PSFL.
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(license (list license:bsd-2 license:psfl))
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(properties `((python2-variant . ,(delay python2-patsy))))))
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(license (list license:bsd-2 license:psfl))))
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(define-public python2-patsy
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(let ((patsy (package-with-python2 (strip-python2-variant python-patsy))))
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(package (inherit patsy)
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(native-inputs
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`(("python2-setuptools" ,python2-setuptools)
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,@(package-native-inputs patsy))))))
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(package-with-python2 python-patsy))
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(define-public python-statsmodels
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(package
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@ -3172,11 +3172,7 @@ (define-public python-feedparser
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l:freebsd-doc)))) ; documentation
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(define-public python2-feedparser
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(let ((base (package-with-python2
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(strip-python2-variant python-feedparser))))
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(package (inherit base)
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(native-inputs
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`(("python2-setuptools" ,python2-setuptools))))))
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(package-with-python2 python-feedparser))
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(define-public r-httpuv
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(package
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