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gnu: tadbit: Use G-expression.

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* gnu/packages/bioinformatics.scm (tadbit)[arguments]: Use G-expression.

Change-Id: I4fe4afc41eb3442f243b0e415ddcb363be36ce7f
This commit is contained in:
Ricardo Wurmus 2024-04-30 12:25:38 +02:00
parent 8f8cee9ed9
commit 5def84031f
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GPG key ID: 197A5888235FACAC
1 changed files with 21 additions and 22 deletions
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gnu/packages/bioinformatics.scm
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@ -14113,29 +14113,28 @@ (define-public tadbit
"17nwlvjgqpa7x6jgh56m3di61ynaz34kl1jamyv7r2a5rhfcbkla"))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(add-after 'unpack 'fix-problems-with-setup.py
(lambda* (#:key outputs #:allow-other-keys)
(substitute* "src/test/Makefile"
(("^CFLAGS=") "CFLAGS= -fcommon"))
(list
#:phases
#~(modify-phases %standard-phases
(add-after 'unpack 'fix-problems-with-setup.py
(lambda _
(substitute* "src/test/Makefile"
(("^CFLAGS=") "CFLAGS= -fcommon"))
;; Don't attempt to install the bash completions to
;; the home directory.
(rename-file "extras/.bash_completion"
"extras/tadbit")
(substitute* "setup.py"
(("\\(path.expanduser\\('~'\\)")
(string-append "(\""
(assoc-ref outputs "out")
"/etc/bash_completion.d\""))
(("extras/\\.bash_completion")
"extras/tadbit"))))
(replace 'check
(lambda* (#:key tests? inputs outputs #:allow-other-keys)
(when tests?
(add-installed-pythonpath inputs outputs)
(invoke "python3" "test/test_all.py")))))))
;; Don't attempt to install the bash completions to
;; the home directory.
(rename-file "extras/.bash_completion"
"extras/tadbit")
(substitute* "setup.py"
(("\\(path.expanduser\\('~'\\)")
(string-append "(\"" #$output
"/etc/bash_completion.d\""))
(("extras/\\.bash_completion")
"extras/tadbit"))))
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(invoke "python3" "test/test_all.py")))))))
(native-inputs
(list `(,glib "bin") ;for gtester
glib