mirror of
https://git.in.rschanz.org/ryan77627/guix.git
synced 2024-12-26 14:28:15 -05:00
gnu: Add r-swne.
* gnu/packages/statistics.scm (r-swne): New variable.
This commit is contained in:
parent
98a4da8a13
commit
61d1d4a3c5
1 changed files with 54 additions and 0 deletions
|
@ -6106,6 +6106,60 @@ (define-public r-nnlm
|
|||
regularizations.")
|
||||
(license license:bsd-2))))
|
||||
|
||||
(define-public r-swne
|
||||
(let ((commit "05fc3ee4e09b2c34d99c69d3b97cece4c1c34143")
|
||||
(revision "1"))
|
||||
(package
|
||||
(name "r-swne")
|
||||
(version (git-version "0.6.20" revision commit))
|
||||
(source
|
||||
(origin
|
||||
(method git-fetch)
|
||||
(uri (git-reference
|
||||
(url "https://github.com/yanwu2014/swne")
|
||||
(commit commit)))
|
||||
(file-name (git-file-name name version))
|
||||
(sha256
|
||||
(base32 "0crlpg9kclbv4v8250p3086a3lk6f2hcq79psqkdylc1qnrx3kfx"))))
|
||||
(properties `((upstream-name . "swne")))
|
||||
(build-system r-build-system)
|
||||
(propagated-inputs
|
||||
(list r-fnn
|
||||
r-ggplot2
|
||||
r-ggrepel
|
||||
r-hash
|
||||
r-ica
|
||||
r-igraph
|
||||
r-irlba
|
||||
r-jsonlite
|
||||
r-liger
|
||||
r-mass
|
||||
r-matrix
|
||||
r-mgcv
|
||||
r-nnlm ;not listed but required at install time
|
||||
r-plyr
|
||||
r-proxy
|
||||
r-rcolorbrewer
|
||||
r-rcpp
|
||||
r-rcpparmadillo
|
||||
r-rcppeigen
|
||||
r-reshape
|
||||
r-reshape2
|
||||
r-snow
|
||||
r-umap
|
||||
r-usedist))
|
||||
(home-page "https://github.com/yanwu2014/swne")
|
||||
(synopsis "Visualize high dimensional datasets")
|
||||
(description
|
||||
"@dfn{Similarity Weighted Nonnegative Embedding} (SWNE) is a method for
|
||||
visualizing high dimensional datasets. SWNE uses Nonnegative Matrix
|
||||
Factorization to decompose datasets into latent factors, projects those
|
||||
factors onto 2 dimensions, and embeds samples and key features in 2 dimensions
|
||||
relative to the factors. SWNE can capture both the local and global dataset
|
||||
structure, and allows relevant features to be embedded directly onto the
|
||||
visualization, facilitating interpretation of the data.")
|
||||
(license license:gpl2))))
|
||||
|
||||
(define-public python-rpy2
|
||||
(package
|
||||
(name "python-rpy2")
|
||||
|
|
Loading…
Reference in a new issue