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gnu: Add r-beclear.

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* gnu/packages/bioconductor.scm (r-beclear): New variable.
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Ricardo Wurmus 2021-09-07 11:41:28 +02:00
parent 4867738c7f
commit 62381dce86
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1 changed files with 33 additions and 0 deletions
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33
gnu/packages/bioconductor.scm
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@ -13733,6 +13733,39 @@ (define-public r-megadepth
regions or annotations of your choice from BigWig files.")
(license license:artistic2.0)))
(define-public r-beclear
(package
(name "r-beclear")
(version "2.8.0")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "BEclear" version))
(sha256
(base32
"0w18livng2gcmjgvws7pix3gsnj237rs34sgwxsfmn8p5vfx8b30"))))
(properties `((upstream-name . "BEclear")))
(build-system r-build-system)
(propagated-inputs
`(("r-abind" ,r-abind)
("r-biocparallel" ,r-biocparallel)
("r-data-table" ,r-data-table)
("r-futile-logger" ,r-futile-logger)
("r-matrix" ,r-matrix)
("r-outliers" ,r-outliers)
("r-rcpp" ,r-rcpp)
("r-rdpack" ,r-rdpack)))
(native-inputs
`(("r-knitr" ,r-knitr)))
(home-page "https://github.com/uds-helms/BEclear")
(synopsis "Correction of batch effects in DNA methylation data")
(description
"This package provides functions to detect and correct for batch effects
in DNA methylation data. The core function is based on latent factor models
and can also be used to predict missing values in any other matrix containing
real numbers.")
(license license:gpl3)))
(define-public r-tximeta
(package
(name "r-tximeta")