gnu: Add r-grohmm.

* gnu/packages/bioinformatics.scm (r-grohmm): New variable.
This commit is contained in:
Ricardo Wurmus 2016-09-21 22:45:40 +02:00 committed by Ricardo Wurmus
parent 7f903d7300
commit 684f29bd2e
No known key found for this signature in database
GPG key ID: 197A5888235FACAC

View file

@ -5396,6 +5396,32 @@ (define-public r-systempiper
annotation infrastructure.")
(license license:artistic2.0)))
(define-public r-grohmm
(package
(name "r-grohmm")
(version "1.6.0")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "groHMM" version))
(sha256
(base32
"1l9mcyzyc548114ysb9r0q7hgzw3yy7gpiahrzkzj6hblc4f1jyp"))))
(properties `((upstream-name . "groHMM")))
(build-system r-build-system)
(propagated-inputs
`(("r-genomeinfodb" ,r-genomeinfodb)
("r-genomicalignments" ,r-genomicalignments)
("r-genomicranges" ,r-genomicranges)
("r-iranges" ,r-iranges)
("r-rtracklayer" ,r-rtracklayer)
("r-s4vectors" ,r-s4vectors)))
(home-page "https://github.com/Kraus-Lab/groHMM")
(synopsis "GRO-seq analysis pipeline")
(description
"This package provides a pipeline for the analysis of GRO-seq data.")
(license license:gpl3+)))
(define-public vsearch
(package
(name "vsearch")