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gnu: jemalloc: --disable-initial-exec-tls

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Disable the thread local storage model in jemalloc 5 to prevent
shared libraries linked to libjemalloc from crashing on dlopen().
https://github.com/jemalloc/jemalloc/issues/937

This bug affects both Java JNI and python libraries which link to
jemalloc 5, such as RocksDB, which will crash the program when loaded.

* gnu/packages/jemalloc.scm (jemalloc)[arguments]: Add --disable-initial-exec-tls
configure flag.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
This commit is contained in:
Ryan Sundberg 2021-01-29 21:18:56 -08:00 committed by Ludovic Courtès
parent 7f50543d55
commit 68dd6d8093
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1 changed files with 16 additions and 9 deletions
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25
gnu/packages/jemalloc.scm
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@ -2,6 +2,7 @@
;;; Copyright © 2015 Sou Bunnbu <iyzsong@gmail.com>
;;; Copyright © 2017, 2020, 2021 Efraim Flashner <efraim@flashner.co.il>
;;; Copyright © 2017 Eric Bavier <bavier@member.fsf.org>
;;; Copyright © 2021 Ryan Sundberg <ryan@arctype.co>
;;;
;;; This file is part of GNU Guix.
;;;
@ -30,10 +31,10 @@ (define-module (gnu packages jemalloc)
#:use-module (gnu packages perl)
#:use-module (guix build-system gnu))
(define-public jemalloc
(define-public jemalloc-4.5.0
(package
(name "jemalloc")
(version "5.2.1")
(version "4.5.0")
(source (origin
(method url-fetch)
(uri (string-append
@ -41,7 +42,7 @@ (define-public jemalloc
version "/jemalloc-" version ".tar.bz2"))
(sha256
(base32
"1xl7z0vwbn5iycg7amka9jd6hxd8nmfk7nahi4p9w2bnw9f0wcrl"))))
"10373xhpc10pgmai9fkc1z0rs029qlcb3c0qfnvkbwdlcibdh2cl"))))
(build-system gnu-build-system)
(arguments
`(#:phases
@ -61,7 +62,6 @@ (define-public jemalloc
(list "--disable-thp" "CPPFLAGS=-maltivec"))
(_
(list "--disable-thp"))))))
(inputs `(("perl" ,perl)))
;; Install the scripts to a separate output to avoid referencing Perl and
;; Bash in the default output, saving ~75 MiB on the closure.
(outputs '("out" "bin"))
@ -72,10 +72,10 @@ (define-public jemalloc
fragmentation avoidance and scalable concurrency support.")
(license bsd-2)))
(define-public jemalloc-4.5.0
(define-public jemalloc
(package
(inherit jemalloc)
(version "4.5.0")
(inherit jemalloc-4.5.0)
(version "5.2.1")
(source (origin
(method url-fetch)
(uri (string-append
@ -83,5 +83,12 @@ (define-public jemalloc-4.5.0
version "/jemalloc-" version ".tar.bz2"))
(sha256
(base32
"10373xhpc10pgmai9fkc1z0rs029qlcb3c0qfnvkbwdlcibdh2cl"))))
(inputs '())))
"1xl7z0vwbn5iycg7amka9jd6hxd8nmfk7nahi4p9w2bnw9f0wcrl"))))
(arguments
(substitute-keyword-arguments (package-arguments jemalloc-4.5.0)
;; Disable the thread local storage model in jemalloc 5 to prevent
;; shared libraries linked to libjemalloc from crashing on dlopen()
;; https://github.com/jemalloc/jemalloc/issues/937
((#:configure-flags base-configure-flags '())
`(cons "--disable-initial-exec-tls" ,base-configure-flags))))
(inputs `(("perl" ,perl)))))