ryan77627/guix
1
0
Fork 0
mirror of https://git.in.rschanz.org/ryan77627/guix.git synced 2024-12-24 21:38:07 -05:00
Code Issues Projects Releases Packages Wiki Activity Actions

gnu: python-scikit-learn-extra: Update to 0.3.0-1.0f95d8d.

Browse source 
* gnu/packages/machine-learning.scm (python-scikit-learn-extra): Update to
0.3.0-1.0f95d8d.
[arguments]: Move test flags out of 'check phase and to #:test-flags.
[propagated-inputs]: Add python-packaging.

Change-Id: I4081a9364a0646d0c6960a3d155315e8eff8af59
This commit is contained in:
Ricardo Wurmus 2024-01-24 11:26:05 +01:00
parent 90f9528748
commit 6a22f65d66
No known key found for this signature in database
GPG key ID: 197A5888235FACAC
1 changed files with 50 additions and 41 deletions
Show stats Download patch file Download diff file Expand all files Collapse all files

31
gnu/packages/machine-learning.scm
View file

@ -1673,28 +1673,36 @@ (define-public python-scikit-learn
(license license:bsd-3)))
(define-public python-scikit-learn-extra
;; This commit fixes an incompatibility with newer versions of scikit-learn
(let ((commit "0f95d8dda4c69f9de4fb002366041adcb1302f3b")
(revision "1"))
(package
(name "python-scikit-learn-extra")
(version "0.3.0")
(version (git-version "0.3.0" revision commit))
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/scikit-learn-contrib/scikit-learn-extra")
(commit (string-append "v" version))))
(commit commit)))
(file-name (git-file-name name version))
(sha256
(base32 "0yy6ka94ss88f3r7b6mpjf1l8lnv7aabhsg844pigfj8lfiv0wvl"))))
(base32 "0a248sff1psfwzmngj465gzyisq20d83nzpwpq2cspxhih51m6j9"))))
(build-system pyproject-build-system)
(arguments
(list #:phases
(list
#:test-flags
;; ignore tests that require network
'(list "--pyargs" "sklearn_extra"
"-k" "not test_build")
#:phases
#~(modify-phases %standard-phases
(add-after 'build 'build-ext
(lambda _
(invoke "python" "setup.py" "build_ext"
"--inplace")))
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(lambda* (#:key tests? test-flags #:allow-other-keys)
(when tests?
;; Restrict OpenBLAS threads to prevent segfaults while testing!
(setenv "OPENBLAS_NUM_THREADS" "1")
@ -1705,11 +1713,12 @@ (define-public python-scikit-learn-extra
;; Step out of the source directory to avoid interference;
;; we want to run the installed code with extensions etc.
(with-directory-excursion "/tmp"
(invoke "pytest" "-vv" "--pyargs"
"sklearn_extra"
;; ignore tests that require network
"-k" "not test_build"))))))))
(propagated-inputs (list python-numpy python-scikit-learn python-scipy))
(apply invoke "pytest" "-vv" test-flags))))))))
(propagated-inputs
(list python-numpy
python-scikit-learn
python-scipy
python-packaging))
(native-inputs (list python-pytest python-pytest-cov python-cython))
(home-page "https://github.com/scikit-learn-contrib/scikit-learn-extra")
(synopsis "Set of tools for scikit-learn")
@ -1718,7 +1727,7 @@ (define-public python-scikit-learn-extra
scikit-learn. It includes algorithms that are useful but do not satisfy the
scikit-learn inclusion criteria, for instance due to their novelty or lower
citation number.")
(license license:bsd-3)))
(license license:bsd-3))))
(define-public python-thinc
(package