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gnu: Add r-bhc.
* gnu/packages/bioconductor.scm (r-bhc): New variable.
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@ -6600,3 +6600,29 @@ (define-public r-bgx
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"This package provides tools for Bayesian integrated analysis of
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"This package provides tools for Bayesian integrated analysis of
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Affymetrix GeneChips.")
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Affymetrix GeneChips.")
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(license license:gpl2)))
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(license license:gpl2)))
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(define-public r-bhc
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(package
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(name "r-bhc")
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(version "1.38.0")
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(source
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(origin
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(method url-fetch)
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(uri (bioconductor-uri "BHC" version))
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(sha256
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(base32
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"1bxx3jak8mgvay3j1xd59bb9j86pzl6hh5abxww9x1b7rswmy1jh"))))
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(properties `((upstream-name . "BHC")))
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(build-system r-build-system)
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(home-page "https://bioconductor.org/packages/BHC/")
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(synopsis "Bayesian hierarchical clustering")
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(description
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"The method implemented in this package performs bottom-up hierarchical
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clustering, using a Dirichlet Process (infinite mixture) to model uncertainty
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in the data and Bayesian model selection to decide at each step which clusters
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to merge. This avoids several limitations of traditional methods, for example
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how many clusters there should be and how to choose a principled distance
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metric. This implementation accepts multinomial (i.e. discrete, with 2+
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categories) or time-series data. This version also includes a randomised
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algorithm which is more efficient for larger data sets.")
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(license license:gpl3)))
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