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gnu: Add r-alphabeta.
* gnu/packages/bioconductor.scm (r-alphabeta): New variable.
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@ -2301,6 +2301,45 @@ (define-public r-aldex2
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;; package's LICENSE is specified as GPL-3.
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;; package's LICENSE is specified as GPL-3.
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(license (list license:agpl3+ license:gpl2+ license:gpl3))))
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(license (list license:agpl3+ license:gpl2+ license:gpl3))))
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(define-public r-alphabeta
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(package
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(name "r-alphabeta")
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(version "1.10.0")
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(source (origin
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(method url-fetch)
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(uri (bioconductor-uri "AlphaBeta" version))
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(sha256
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(base32
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"1ikdrigma02gnl6ggrc89bjsiqmd7knpb9kw7nqyrdnv3qjd9iag"))))
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(properties `((upstream-name . "AlphaBeta")))
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(build-system r-build-system)
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(propagated-inputs
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(list r-biocparallel
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r-data-table
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r-dplyr
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r-expm
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r-ggplot2
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r-gtools
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r-igraph
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r-optimx
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r-plotly
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r-stringr))
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(native-inputs (list r-knitr))
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(home-page "https://bioconductor.org/packages/AlphaBeta")
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(synopsis "Estimate epimutation rates and spectra from DNA methylations in plants")
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(description
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"The package @code{AlphaBeta} is a computational method for estimating
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epimutation rates and spectra from high-throughput DNA methylation data in
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plants. The method has been specifically designed to:
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@itemize
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@item analyze @emph{germline} epimutations in the context of
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multi-generational mutation accumulation lines;
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@item analyze @emph{somatic} epimutations in the context of plant development
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and aging.
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@end itemize")
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(license license:gpl3)))
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(define-public r-alpine
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(define-public r-alpine
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(package
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(package
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(name "r-alpine")
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(name "r-alpine")
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