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gnu: r-karyoploter: Update to 1.14.0.

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* gnu/packages/bioconductor.scm (r-karyoploter): Update to 1.14.0.
[propagated-inputs]: Add r-genomicfeatures.
[native-inputs]: Add r-knitr.
This commit is contained in:
Ricardo Wurmus 2020-06-13 00:28:45 +02:00
parent 1e37caca52
commit 6e2dc9e385
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1 changed files with 16 additions and 13 deletions
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29
gnu/packages/bioconductor.scm
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@ -2701,29 +2701,32 @@ (define-public r-ebseq
(define-public r-karyoploter (define-public r-karyoploter
(package (package
(name "r-karyoploter") (name "r-karyoploter")
(version "1.12.4") (version "1.14.0")
(source (origin (source (origin
(method url-fetch) (method url-fetch)
(uri (bioconductor-uri "karyoploteR" version)) (uri (bioconductor-uri "karyoploteR" version))
(sha256 (sha256
(base32 (base32
"03jmfgmw35hrgn3pc5lq6pblzhfx9fp4l6dx50rp303lr7kjxp9v")))) "0h0gk4xd95k5phy6qcsv7j931d7gk3p24i2fg4mz5dsk110lpifs"))))
(build-system r-build-system) (build-system r-build-system)
(propagated-inputs (propagated-inputs
`(("r-regioner" ,r-regioner) `(("r-annotationdbi" ,r-annotationdbi)
("r-genomicranges" ,r-genomicranges) ("r-bamsignals" ,r-bamsignals)
("r-iranges" ,r-iranges) ("r-bezier" ,r-bezier)
("r-rsamtools" ,r-rsamtools)
("r-memoise" ,r-memoise)
("r-rtracklayer" ,r-rtracklayer)
("r-genomeinfodb" ,r-genomeinfodb)
("r-s4vectors" ,r-s4vectors)
("r-biovizbase" ,r-biovizbase) ("r-biovizbase" ,r-biovizbase)
("r-digest" ,r-digest) ("r-digest" ,r-digest)
("r-bezier" ,r-bezier) ("r-genomeinfodb" ,r-genomeinfodb)
("r-bamsignals" ,r-bamsignals) ("r-genomicfeatures" ,r-genomicfeatures)
("r-annotationdbi" ,r-annotationdbi) ("r-genomicranges" ,r-genomicranges)
("r-iranges" ,r-iranges)
("r-memoise" ,r-memoise)
("r-regioner" ,r-regioner)
("r-rsamtools" ,r-rsamtools)
("r-rtracklayer" ,r-rtracklayer)
("r-s4vectors" ,r-s4vectors)
("r-variantannotation" ,r-variantannotation))) ("r-variantannotation" ,r-variantannotation)))
(native-inputs
`(("r-knitr" ,r-knitr)))
(home-page "https://bioconductor.org/packages/karyoploteR/") (home-page "https://bioconductor.org/packages/karyoploteR/")
(synopsis "Plot customizable linear genomes displaying arbitrary data") (synopsis "Plot customizable linear genomes displaying arbitrary data")
(description "This package creates karyotype plots of arbitrary genomes and (description "This package creates karyotype plots of arbitrary genomes and