mirror of
https://git.in.rschanz.org/ryan77627/guix.git
synced 2024-12-28 07:12:30 -05:00
gnu: r-valr: Update to 0.6.4.
* gnu/packages/cran.scm (r-valr): Move from here... * gnu/packages/bioconductor.scm (r-valr): ...to here. Update to 0.6.4. [propagated-inputs]: Add r-rtracklayer.
This commit is contained in:
parent
d4e0534c4f
commit
734e1b185f
2 changed files with 33 additions and 31 deletions
|
@ -4766,6 +4766,39 @@ (define-public r-tximport
|
|||
of gene-level counts.")
|
||||
(license license:gpl2+)))
|
||||
|
||||
;; This is a CRAN package, but it depends on a Bioconductor package.
|
||||
(define-public r-valr
|
||||
(package
|
||||
(name "r-valr")
|
||||
(version "0.6.4")
|
||||
(source
|
||||
(origin
|
||||
(method url-fetch)
|
||||
(uri (cran-uri "valr" version))
|
||||
(sha256
|
||||
(base32
|
||||
"0dd41irvibh6rwi52bw4zg4m7wpyihlp1kdkb8fdji3csw2fiz4k"))))
|
||||
(build-system r-build-system)
|
||||
(propagated-inputs
|
||||
(list r-broom
|
||||
r-dplyr
|
||||
r-ggplot2
|
||||
r-rcpp
|
||||
r-readr
|
||||
r-rlang
|
||||
r-rtracklayer ;bioconductor package
|
||||
r-stringr
|
||||
r-tibble))
|
||||
(native-inputs
|
||||
(list r-knitr))
|
||||
(home-page "https://github.com/rnabioco/valr")
|
||||
(synopsis "Genome interval arithmetic in R")
|
||||
(description
|
||||
"This package enables you to read and manipulate genome intervals and
|
||||
signals. It provides functionality similar to command-line tool suites within
|
||||
R, enabling interactive analysis and visualization of genome-scale data.")
|
||||
(license license:expat)))
|
||||
|
||||
(define-public r-variantannotation
|
||||
(package
|
||||
(name "r-variantannotation")
|
||||
|
|
|
@ -15677,37 +15677,6 @@ (define-public r-apcluster
|
|||
plotting functions are available for analyzing clustering results.")
|
||||
(license license:gpl2+)))
|
||||
|
||||
(define-public r-valr
|
||||
(package
|
||||
(name "r-valr")
|
||||
(version "0.6.3")
|
||||
(source
|
||||
(origin
|
||||
(method url-fetch)
|
||||
(uri (cran-uri "valr" version))
|
||||
(sha256
|
||||
(base32
|
||||
"1lzdlw0mw06rymyjzwf4i8rx1z6zxpwxxqfsc9ggqlnhq6bfhy93"))))
|
||||
(build-system r-build-system)
|
||||
(propagated-inputs
|
||||
(list r-broom
|
||||
r-dplyr
|
||||
r-ggplot2
|
||||
r-rcpp
|
||||
r-readr
|
||||
r-rlang
|
||||
r-stringr
|
||||
r-tibble))
|
||||
(native-inputs
|
||||
(list r-knitr))
|
||||
(home-page "https://github.com/rnabioco/valr")
|
||||
(synopsis "Genome interval arithmetic in R")
|
||||
(description
|
||||
"This package enables you to read and manipulate genome intervals and
|
||||
signals. It provides functionality similar to command-line tool suites within
|
||||
R, enabling interactive analysis and visualization of genome-scale data.")
|
||||
(license license:expat)))
|
||||
|
||||
(define-public r-rematch2
|
||||
(package
|
||||
(name "r-rematch2")
|
||||
|
|
Loading…
Reference in a new issue