mirror of
https://git.in.rschanz.org/ryan77627/guix.git
synced 2025-01-24 11:39:46 -05:00
gnu: Add IRanges.
* gnu/packages/bioinformatics.scm (r-iranges): New variable.
This commit is contained in:
parent
7485129e4f
commit
78addcb0eb
1 changed files with 30 additions and 0 deletions
|
@ -3215,6 +3215,36 @@ (define-public r-s4vectors
|
||||||
S4Vectors package itself.")
|
S4Vectors package itself.")
|
||||||
(license license:artistic2.0)))
|
(license license:artistic2.0)))
|
||||||
|
|
||||||
|
(define-public r-iranges
|
||||||
|
(package
|
||||||
|
(name "r-iranges")
|
||||||
|
(version "2.4.6")
|
||||||
|
(source (origin
|
||||||
|
(method url-fetch)
|
||||||
|
(uri (bioconductor-uri "IRanges" version))
|
||||||
|
(sha256
|
||||||
|
(base32
|
||||||
|
"00x0266sys1fc5ipa639y84p6m6mgspk2xb099vcwmd3w4hypj9d"))))
|
||||||
|
(properties
|
||||||
|
`((upstream-name . "IRanges")
|
||||||
|
(r-repository . bioconductor)))
|
||||||
|
(build-system r-build-system)
|
||||||
|
(propagated-inputs
|
||||||
|
`(("r-biocgenerics" ,r-biocgenerics)
|
||||||
|
("r-s4vectors" ,r-s4vectors)))
|
||||||
|
(home-page "http://bioconductor.org/packages/IRanges")
|
||||||
|
(synopsis "Infrastructure for manipulating intervals on sequences")
|
||||||
|
(description
|
||||||
|
"This package provides efficient low-level and highly reusable S4 classes
|
||||||
|
for storing ranges of integers, RLE vectors (Run-Length Encoding), and, more
|
||||||
|
generally, data that can be organized sequentially (formally defined as
|
||||||
|
@code{Vector} objects), as well as views on these @code{Vector} objects.
|
||||||
|
Efficient list-like classes are also provided for storing big collections of
|
||||||
|
instances of the basic classes. All classes in the package use consistent
|
||||||
|
naming and share the same rich and consistent \"Vector API\" as much as
|
||||||
|
possible.")
|
||||||
|
(license license:artistic2.0)))
|
||||||
|
|
||||||
(define-public r-qtl
|
(define-public r-qtl
|
||||||
(package
|
(package
|
||||||
(name "r-qtl")
|
(name "r-qtl")
|
||||||
|
|
Loading…
Reference in a new issue