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gnu: Add r-biovizbase.
* gnu/packages/bioinformatics.scm (r-biovizbase): New variable.
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@ -9675,6 +9675,47 @@ (define-public r-organismdbi
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the fact that each of these packages implements a select methods.")
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(license license:artistic2.0)))
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(define-public r-biovizbase
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(package
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(name "r-biovizbase")
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(version "1.26.0")
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(source
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(origin
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(method url-fetch)
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(uri (bioconductor-uri "biovizBase" version))
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(sha256
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(base32
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"14l4vhj0a4ssr9m9zdzz3qpd4qw1mhgq5bmxq7jhrq3j9kmd6i2f"))))
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(properties `((upstream-name . "biovizBase")))
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(build-system r-build-system)
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(propagated-inputs
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`(("r-annotationdbi" ,r-annotationdbi)
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("r-annotationfilter" ,r-annotationfilter)
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("r-biocgenerics" ,r-biocgenerics)
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("r-biostrings" ,r-biostrings)
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("r-dichromat" ,r-dichromat)
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("r-ensembldb" ,r-ensembldb)
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("r-genomeinfodb" ,r-genomeinfodb)
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("r-genomicalignments" ,r-genomicalignments)
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("r-genomicfeatures" ,r-genomicfeatures)
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("r-genomicranges" ,r-genomicranges)
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("r-hmisc" ,r-hmisc)
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("r-iranges" ,r-iranges)
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("r-rcolorbrewer" ,r-rcolorbrewer)
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("r-rsamtools" ,r-rsamtools)
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("r-s4vectors" ,r-s4vectors)
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("r-scales" ,r-scales)
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("r-summarizedexperiment" ,r-summarizedexperiment)
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("r-variantannotation" ,r-variantannotation)))
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(home-page "https://bioconductor.org/packages/biovizBase")
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(synopsis "Basic graphic utilities for visualization of genomic data")
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(description
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"The biovizBase package is designed to provide a set of utilities, color
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schemes and conventions for genomic data. It serves as the base for various
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high-level packages for biological data visualization. This saves development
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effort and encourages consistency.")
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(license license:artistic2.0)))
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(define-public r-qvalue
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(package
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(name "r-qvalue")
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