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gnu: r-catalyst: Update description.

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* gnu/packages/bioconductor.scm (r-catalyst)[description]: Add Texinfo markup
and clarify a sentence.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
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Mădălin Ionel Patrașcu 2022-04-13 13:21:03 +02:00 committed by Ricardo Wurmus
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@ -13791,20 +13791,25 @@ (define-public r-catalyst
r-summarizedexperiment))
(native-inputs
(list r-knitr))
(home-page
"https://github.com/HelenaLC/CATALYST")
(home-page "https://github.com/HelenaLC/CATALYST")
(synopsis "Cytometry data analysis tools")
(description
"This package is Cytometry dATa anALYSis Tools (CATALYST). Mass
cytometry (CyTOF) uses heavy metal isotopes rather than fluorescent tags as
reporters to label antibodies, thereby substantially decreasing spectral
overlap and allowing for examination of over 50 parameters at the single cell
level. While spectral overlap is significantly less pronounced in CyTOF than
flow cytometry, spillover due to detection sensitivity, isotopic impurities,
and oxide formation can impede data interpretability. We designed
CATALYST (Cytometry dATa anALYSis Tools) to provide a pipeline for
preprocessing of cytometry data, including i) normalization using bead
standards, ii) single-cell deconvolution, and iii) bead-based compensation.")
"This package is @dfn{Cytometry dATa anALYSis Tools} (CATALYST). Mass
cytometry like @dfn{Cytometry by time of flight} (CyTOF) uses heavy metal
isotopes rather than fluorescent tags as reporters to label antibodies,
thereby substantially decreasing spectral overlap and allowing for examination
of over 50 parameters at the single cell level. While spectral overlap is
significantly less pronounced in CyTOF than flow cytometry, spillover due to
detection sensitivity, isotopic impurities, and oxide formation can impede
data interpretability. @code{CATALYST} was designed to provide a pipeline for
preprocessing of cytometry data, including:
@enumerate
@item normalization using bead standards;
@item single-cell deconvolution;
@item bead-based compensation.
@end enumerate
")
(license license:gpl2+)))
(define-public r-erma