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gnu: Add python-pyfaidx.

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* gnu/packages/bioinformatics.scm (python-pyfaidx): New variable.
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Ricardo Wurmus 2018-09-05 16:00:03 +02:00 committed by Ricardo Wurmus
parent 1f41f01c14
commit 80f4db91b1
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gnu/packages/bioinformatics.scm
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@ -13556,3 +13556,25 @@ (define-public python-pypairix
"Pypairix is a Python module for fast querying on a pairix-indexed "Pypairix is a Python module for fast querying on a pairix-indexed
bgzipped text file that contains a pair of genomic coordinates per line.") bgzipped text file that contains a pair of genomic coordinates per line.")
(license license:expat))) (license license:expat)))
(define-public python-pyfaidx
(package
(name "python-pyfaidx")
(version "0.5.4.2")
(source
(origin
(method url-fetch)
(uri (pypi-uri "pyfaidx" version))
(sha256
(base32
"0y5zyjksj1rdglj601xd2bbni5abhdh622y3ck76chyzxz9z4rx8"))))
(build-system python-build-system)
(propagated-inputs
`(("python-setuptools" ,python-setuptools)
("python-six" ,python-six)))
(home-page "http://mattshirley.com")
(synopsis "Random access to fasta subsequences")
(description
"This package provides procedures for efficient pythonic random access to
fasta subsequences.")
(license license:bsd-3)))