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gnu: Add r-harshlight.
* gnu/packages/bioconductor.scm (r-harshlight): New variable.
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@ -5854,6 +5854,33 @@ (define-public r-gseabase
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Enrichment Analysis} (GSEA).")
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(license license:artistic2.0)))
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(define-public r-harshlight
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(package
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(name "r-harshlight")
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(version "1.70.0")
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(source (origin
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(method url-fetch)
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(uri (bioconductor-uri "Harshlight" version))
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(sha256
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(base32
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"0asjgcnwawg8x7ql0srhb2011rvb4kr2cpsa1cy28nfmjfvdf0qm"))))
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(properties `((upstream-name . "Harshlight")))
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(build-system r-build-system)
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(propagated-inputs
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(list r-affy
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r-altcdfenvs
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r-biobase))
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(home-page "http://asterion.rockefeller.edu/Harshlight/")
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(synopsis "Corrective make-up program for microarray chips")
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(description
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"The package detects extended diffuse and compact blemishes on microarray
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chips. Harshlight marks the areas in a collection of chips (affybatch
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objects). A corrected @code{AffyBatch} object will result. The package
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replaces the defected areas with @code{N/A}s or the median of the values of
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the same probe. The new version handles the substitute value as a whole
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matrix to solve the memory problem.")
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(license license:gpl2+)))
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(define-public r-hpar
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(package
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(name "r-hpar")
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