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gnu: r-beachmat: Move to (gnu packages bioconductor).

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* gnu/packages/bioinformatics.scm (r-beachmat): Move from here...
* gnu/packages/bioconductor.scm (r-beachmat): ...to here.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
This commit is contained in:
zimoun 2020-09-14 18:07:43 +02:00 committed by Ricardo Wurmus
parent 916a3e59ab
commit 8863c14cd8
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GPG key ID: 197A5888235FACAC
2 changed files with 25 additions and 25 deletions
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25
gnu/packages/bioconductor.scm
View file

@ -8347,6 +8347,31 @@ (define-public r-rgraphviz
objects from the @code{graph} package.")
(license license:epl1.0)))
(define-public r-beachmat
(package
(name "r-beachmat")
(version "2.4.0")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "beachmat" version))
(sha256
(base32
"1vl6jbf9ia78cm4ikdb8vz04jv4b46zhvg5i006c63a9pzw7zhxi"))))
(build-system r-build-system)
(propagated-inputs
`(("r-biocgenerics" ,r-biocgenerics)
("r-delayedarray" ,r-delayedarray)
("r-matrix" ,r-matrix)))
(native-inputs
`(("r-knitr" ,r-knitr)))
(home-page "https://bioconductor.org/packages/beachmat")
(synopsis "Compiling Bioconductor to handle each matrix type")
(description "This package provides a consistent C++ class interface for a
variety of commonly used matrix types, including sparse and HDF5-backed
matrices.")
(license license:gpl3)))
(define-public r-singlecellexperiment
(package
(name "r-singlecellexperiment")

25
gnu/packages/bioinformatics.scm
View file

@ -10766,31 +10766,6 @@ (define-public r-rhdf5lib
packages.")
(license license:artistic2.0)))
(define-public r-beachmat
(package
(name "r-beachmat")
(version "2.4.0")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "beachmat" version))
(sha256
(base32
"1vl6jbf9ia78cm4ikdb8vz04jv4b46zhvg5i006c63a9pzw7zhxi"))))
(build-system r-build-system)
(propagated-inputs
`(("r-biocgenerics" ,r-biocgenerics)
("r-delayedarray" ,r-delayedarray)
("r-matrix" ,r-matrix)))
(native-inputs
`(("r-knitr" ,r-knitr)))
(home-page "https://bioconductor.org/packages/beachmat")
(synopsis "Compiling Bioconductor to handle each matrix type")
(description "This package provides a consistent C++ class interface for a
variety of commonly used matrix types, including sparse and HDF5-backed
matrices.")
(license license:gpl3)))
(define-public r-dropbead
(let ((commit "d746c6f3b32110428ea56d6a0001ce52a251c247")
(revision "2"))