ryan77627/guix
1
0
Fork 0
mirror of https://git.in.rschanz.org/ryan77627/guix.git synced 2025-01-11 21:59:08 -05:00
Code Issues Projects Releases Packages Wiki Activity Actions

gnu: Add r-activepathways.

Browse source 
* gnu/packages/bioconductor.scm (r-activepathways): New variable.
This commit is contained in:
Ricardo Wurmus 2019-12-13 22:57:59 +01:00
parent 3e9e242aa5
commit 8e6f63dd83
No known key found for this signature in database
GPG key ID: 197A5888235FACAC
1 changed files with 30 additions and 0 deletions
Show stats Download patch file Download diff file Expand all files Collapse all files

30
gnu/packages/bioconductor.scm
View file

@ -6093,3 +6093,33 @@ (define-public r-activedriverwgs
human genome. ActiveDriverWGS detects coding and noncoding driver elements
using whole genome sequencing data.")
(license license:gpl3)))
;; This is a CRAN package, but it depends on Bioconductor packages, so we put
;; it here.
(define-public r-activepathways
(package
(name "r-activepathways")
(version "1.0.1")
(source
(origin
(method url-fetch)
(uri (cran-uri "ActivePathways" version))
(sha256
(base32
"1xb0d1svmzw404pv8ja6wr4773k7x2lxkrzrayilvzqbfzj1wx20"))))
(properties
`((upstream-name . "ActivePathways")))
(build-system r-build-system)
(propagated-inputs
`(("r-data-table" ,r-data-table)
("r-ggplot2" ,r-ggplot2)
("r-metap" ,r-metap)))
(home-page "https://cran.r-project.org/web/packages/ActivePathways/")
(synopsis "Multivariate pathway enrichment analysis")
(description
"This package represents an integrative method of analyzing multi omics
data that conducts enrichment analysis of annotated gene sets. ActivePathways
uses a statistical data fusion approach, rationalizes contributing evidence
and highlights associated genes, improving systems-level understanding of
cellular organization in health and disease.")
(license license:gpl3)))