From 8e994ea51239c9b1664cb343be578ef7a052f886 Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Mon, 28 Mar 2022 15:22:49 +0200 Subject: [PATCH] gnu: Add r-homologene. * gnu/packages/cran.scm (r-homologene): New variable. --- gnu/packages/cran.scm | 25 +++++++++++++++++++++++++ 1 file changed, 25 insertions(+) diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 23645faa8a..0ed601b4d3 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -2821,6 +2821,31 @@ (define-public r-mbess ;; Either version of the GPL. (license (list license:gpl2 license:gpl3)))) +(define-public r-homologene + (package + (name "r-homologene") + (version "1.4.68.19.3.27") + (source + (origin + (method url-fetch) + (uri (cran-uri "homologene" version)) + (sha256 + (base32 "0d7wxisk0vqk1n165v1i19bc02zv78h5r5d3jqai5y6nkmwn01sh")))) + (properties `((upstream-name . "homologene"))) + (build-system r-build-system) + (propagated-inputs + (list r-dplyr r-magrittr r-purrr r-r-utils r-readr)) + (home-page "https://github.com/oganm/homologene") + (synopsis "Quick access to homologene and gene annotation updates") + (description + "This package provides a wrapper for the homologene database by the +National Center for Biotechnology Information (NCBI). It allows searching for +gene homologs across species. The package also includes an updated version of +the homologene database where gene identifiers and symbols are replaced with +their latest (at the time of submission) version and functions to fetch latest +annotation data to keep updated.") + (license license:expat))) + (define-public r-ggtern (package (name "r-ggtern")