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gnu: Add bustools.
* gnu/packages/bioinformatics.scm (bustools): New variable. Change-Id: I24a936ad1d630663a41855a833e35fb9caa0155c
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@ -575,6 +575,30 @@ (define-public bitmapperbs
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whole-genome bisulfite sequencing (WGBS) reads from directional protocol.")
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(license license:asl2.0)))
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(define-public bustools
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(package
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(name "bustools")
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(version "0.43.2")
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(source (origin
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(method git-fetch)
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(uri (git-reference
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(url "https://github.com/BUStools/bustools")
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(commit (string-append "v" version))))
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(file-name (git-file-name name version))
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(sha256
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(base32
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"068kjlc4d528269nl5mc3j8h2c95r1v545d3fi1iw1ckg8rba0hg"))))
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(build-system cmake-build-system)
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(arguments (list #:tests? #f)) ;no test target
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(inputs (list zlib))
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(home-page "https://bustools.github.io")
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(synopsis "Tools for working with BUS files")
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(description "bustools is a program for manipulating BUS files for single
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cell RNA-Seq datasets. It can be used to error correct barcodes, collapse
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UMIs, produce gene count or transcript compatibility count matrices, and is useful
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for many other tasks.")
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(license license:bsd-2)))
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(define-public cellsnp-lite
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;; Last release is from November 2021 and does not contain fixes.
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(let ((commit "0885d746b0b1ea65c8ef92f8943ca7669ca9734a")
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