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gnu: Add r-tcgautils.
* gnu/packages/bioconductor.scm (r-tcgautils): New variable.
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@ -9440,6 +9440,44 @@ (define-public r-singscore
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level.")
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(license license:gpl3)))
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(define-public r-tcgautils
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(package
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(name "r-tcgautils")
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(version "1.20.2")
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(source (origin
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(method url-fetch)
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(uri (bioconductor-uri "TCGAutils" version))
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(sha256
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(base32
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"0nnfrd5x3mii9adizvz79jinlxn2lhg4civ9v0wwygmdhk7rrm1n"))))
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(properties `((upstream-name . "TCGAutils")))
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(build-system r-build-system)
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(propagated-inputs (list r-annotationdbi
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r-biocgenerics
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r-genomeinfodb
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r-genomicdatacommons
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r-genomicfeatures
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r-genomicranges
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r-iranges
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r-multiassayexperiment
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r-raggedexperiment
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r-rvest
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r-s4vectors
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r-stringr
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r-summarizedexperiment
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r-xml2))
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(native-inputs (list r-knitr))
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(home-page "https://bioconductor.org/packages/TCGAutils")
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(synopsis "TCGA utility functions for data management")
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(description
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"This package provides a suite of helper functions for checking and
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manipulating TCGA data including data obtained from the @code{curatedTCGAData}
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experiment package. These functions aim to simplify and make working with
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TCGA data more manageable. Exported functions include those that import data
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from flat files into Bioconductor objects, convert row annotations, and
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identifier translation via the GDC API.")
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(license license:artistic2.0)))
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(define-public r-tkwidgets
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(package
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(name "r-tkwidgets")
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