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gnu: Add r-mast.

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* gnu/packages/bioconductor.scm (r-mast): New variable.
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Ricardo Wurmus 2019-03-13 12:53:03 +01:00
parent 251e08301a
commit 925fcdbb79
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1 changed files with 33 additions and 0 deletions
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33
gnu/packages/bioconductor.scm
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@ -1932,3 +1932,36 @@ (define-public r-icobra
classification (assignment) methods. It also contains a Shiny application for
interactive exploration of results.")
(license license:gpl2+)))
(define-public r-mast
(package
(name "r-mast")
(version "1.8.2")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "MAST" version))
(sha256
(base32
"0rhx655dza0m6yg9jcfz2nmxqahvxx2l91kqgyp7qai0bzz9d9ix"))))
(properties `((upstream-name . "MAST")))
(build-system r-build-system)
(propagated-inputs
`(("r-abind" ,r-abind)
("r-biobase" ,r-biobase)
("r-biocgenerics" ,r-biocgenerics)
("r-data-table" ,r-data-table)
("r-ggplot2" ,r-ggplot2)
("r-plyr" ,r-plyr)
("r-progress" ,r-progress)
("r-reshape2" ,r-reshape2)
("r-s4vectors" ,r-s4vectors)
("r-singlecellexperiment" ,r-singlecellexperiment)
("r-stringr" ,r-stringr)
("r-summarizedexperiment" ,r-summarizedexperiment)))
(home-page "https://github.com/RGLab/MAST/")
(synopsis "Model-based analysis of single cell transcriptomics")
(description
"This package provides methods and models for handling zero-inflated
single cell assay data.")
(license license:gpl2+)))