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gnu: Add r-zfpkm.
* gnu/packages/bioconductor.scm (r-zfpkm): New variable.
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@ -4152,3 +4152,30 @@ (define-public r-webbioc
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deployed as a centralized bioinformatics resource for use by many users.
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Currently only Affymetrix oligonucleotide analysis is supported.")
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(license license:gpl2+)))
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(define-public r-zfpkm
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(package
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(name "r-zfpkm")
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(version "1.4.1")
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(source
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(origin
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(method url-fetch)
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(uri (bioconductor-uri "zFPKM" version))
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(sha256
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(base32
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"0rvfrjxxvfng9fxxn316gm96v4rahx62vlk3axr2bzjbi1r4s8v5"))))
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(properties `((upstream-name . "zFPKM")))
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(build-system r-build-system)
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(propagated-inputs
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`(("r-checkmate" ,r-checkmate)
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("r-dplyr" ,r-dplyr)
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("r-ggplot2" ,r-ggplot2)
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("r-summarizedexperiment" ,r-summarizedexperiment)
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("r-tidyr" ,r-tidyr)))
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(home-page "https://github.com/ronammar/zFPKM/")
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(synopsis "Functions to facilitate zFPKM transformations")
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(description
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"This is a package to perform the zFPKM transform on RNA-seq FPKM data.
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This algorithm is based on the publication by Hart et al., 2013 (Pubmed ID
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24215113).")
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(license license:gpl3)))
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