gnu: Add r-zfpkm.

* gnu/packages/bioconductor.scm (r-zfpkm): New variable.
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Ricardo Wurmus 2019-04-03 16:29:49 +02:00
parent 6b12f21363
commit 9800d859a7
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@ -4152,3 +4152,30 @@ (define-public r-webbioc
deployed as a centralized bioinformatics resource for use by many users. deployed as a centralized bioinformatics resource for use by many users.
Currently only Affymetrix oligonucleotide analysis is supported.") Currently only Affymetrix oligonucleotide analysis is supported.")
(license license:gpl2+))) (license license:gpl2+)))
(define-public r-zfpkm
(package
(name "r-zfpkm")
(version "1.4.1")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "zFPKM" version))
(sha256
(base32
"0rvfrjxxvfng9fxxn316gm96v4rahx62vlk3axr2bzjbi1r4s8v5"))))
(properties `((upstream-name . "zFPKM")))
(build-system r-build-system)
(propagated-inputs
`(("r-checkmate" ,r-checkmate)
("r-dplyr" ,r-dplyr)
("r-ggplot2" ,r-ggplot2)
("r-summarizedexperiment" ,r-summarizedexperiment)
("r-tidyr" ,r-tidyr)))
(home-page "https://github.com/ronammar/zFPKM/")
(synopsis "Functions to facilitate zFPKM transformations")
(description
"This is a package to perform the zFPKM transform on RNA-seq FPKM data.
This algorithm is based on the publication by Hart et al., 2013 (Pubmed ID
24215113).")
(license license:gpl3)))