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gnu: Add r-yarn.

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* gnu/packages/bioconductor.scm (r-yarn): New variable.
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Ricardo Wurmus 2019-03-29 22:30:47 +01:00
parent 59cf26292f
commit 98a2af31a8
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gnu/packages/bioconductor.scm
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@ -3879,3 +3879,38 @@ (define-public r-quantro
there are global differences in the distributions between the user-defined
groups.")
(license license:gpl3+)))
(define-public r-yarn
(package
(name "r-yarn")
(version "1.8.1")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "yarn" version))
(sha256
(base32
"0c84x1zq34hadpsyaa873r8kg0jcxp09c2z63377hlmhsll90l7s"))))
(build-system r-build-system)
(propagated-inputs
`(("r-biobase" ,r-biobase)
("r-biomart" ,r-biomart)
("r-downloader" ,r-downloader)
("r-edger" ,r-edger)
("r-gplots" ,r-gplots)
("r-limma" ,r-limma)
("r-matrixstats" ,r-matrixstats)
("r-preprocesscore" ,r-preprocesscore)
("r-quantro" ,r-quantro)
("r-rcolorbrewer" ,r-rcolorbrewer)
("r-readr" ,r-readr)))
(home-page "https://bioconductor.org/packages/yarn/")
(synopsis "Robust multi-condition RNA-Seq preprocessing and normalization")
(description
"Expedite large RNA-Seq analyses using a combination of previously
developed tools. YARN is meant to make it easier for the user in performing
basic mis-annotation quality control, filtering, and condition-aware
normalization. YARN leverages many Bioconductor tools and statistical
techniques to account for the large heterogeneity and sparsity found in very
large RNA-seq experiments.")
(license license:artistic2.0)))